Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1092 ATGCTATCAAAAGAAGAAGGATACGAGACTCTGATTTTCCATACCACTGGAATGGGTGGAAGGGCTATGGAGGATCTGATCAGAAGGGGATTTATACGATGTGTTCTGGACATAACAACAACAGAGGTTGCTGATTATGTAGTTGGAGGTGTTATGGCTTGTGACAATTCCCACCTTGACCCAGTTCCAGCTGATAAGCAGGTGAACCAGGCAGGAAGGACCAATTGGCAAACACTCTTGGGCTTTCCTGGTGGGCATGAAACCCAGAATTGCAATGGGGTAGTTCAGAATCTGAATCTAGTTCGACTTGGAGCAATGTTGGGAAGCAACTGGAAATATGGGCCTCATGCTGCTGCAACTCACTTAGACTACATGGTTGAGTTTACAGTCACTGTGCCAATTTTGAGTCTTGCTGGAACAATGGATAACTTACCAGCTGGTAACGCATCTGGCTTGGCAGTTATAATTATAATGTCAGTCACCACCTGCCTAATGTCTCTGGTTGCTGTACTGTGCCGACACCAGAATGTCTCCTCTATAATTGGCTCCATGTTCTTCATTGGCGTAATTGAAGCTTTCTATTTCTCAGCATGGATCTCTAAGCCACTCCTGAGCATGCGTGTAAGAATGGATAGCAGGGCAGATTTTCAGGTTCCTGGTCAGAGTGGAATAATGGGACAGCCAAATGAAGACGAATTCCCCATGAACTTCCAAAAATAG 720 0.4514 MLSKEEGYETLIFHTTGMGGRAMEDLIRRGFIRCVLDITTTEVADYVVGGVMACDNSHLDPVPADKQVNQAGRTNWQTLLGFPGGHETQNCNGVVQNLNLVRLGAMLGSNWKYGPHAAATHLDYMVEFTVTVPILSLAGTMDNLPAGNASGLAVIIIMSVTTCLMSLVAVLCRHQNVSSIIGSMFFIGVIEAFYFSAWISKPLLSMRVRMDSRADFQVPGQSGIMGQPNEDEFPMNFQK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1092 239 Pfam Uncharacterised protein family (UPF0261) 4 60 IPR044122 -
Vvi19g1092 239 Gene3D Uncharacterised protein family UPF0261, NC domain 1 71 - -
Vvi19g1092 239 PANTHER UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) 4 62 - -
Vvi19g1092 239 Pfam K+ potassium transporter 147 201 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1092 Vvi-Chr19 16606386 16608320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1092 124 203 Inorganic Solute Cotransporters AT1G70300 50.602 2.09e-13 67.4