Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1091 ATGAAAGCTGAGATAAGGAATGAGCATCACCACCTCCTAGAAGTATCCAAGGTAGCAATGGCAGACGAGATTATCGTGTTGGATTTCCGGCCTAGCATGTTTGGTATGAGGGTCAGAGTTGCCCTGGCAGAGAAGGGTCTCAAGTATGAATATAGAGAGGAGGACCTGTGGAACAAGAGCCCTTTGCTTCTTGAGATGAACCCAGTTCATAAGAAAATCCCAGTTCTGATCCACAATGGAAAGCCCATTTGTGAGTCTCTGATAATAGTTCAGTGTATTGATGAGCTCTATGAACTTGGAAGGAAGATATGGTCAACCAAAGGAGAAGAGCAGGAAACAGCCAAGAAGGAATTCATAGAGTGCCTTAAGCTTTTGGAAGGAGAGCTTGGAGAGAAGCCTTACTTCGGTGGTGAAAAAATTGGGTTTGTAGATGTGGCTCTGGTGACCTTCTCTTGCTGGTTTTATGCATACGAGACCTTTGGCAACTTCAGCATAGAGGCGGAGTGCCCCAAGTTGATCGCTTGGACCAAGAGGTGCATGGAAAGGGAGAGCGTGTCGTCTTCTCTTGCAGACCCCCACAAGGTCCATGGCTTTGTCGTGGTGTTGAGAAAGAAGTTTGGTATAGAGTAG 630 0.4651 MKAEIRNEHHHLLEVSKVAMADEIIVLDFRPSMFGMRVRVALAEKGLKYEYREEDLWNKSPLLLEMNPVHKKIPVLIHNGKPICESLIIVQCIDELYELGRKIWSTKGEEQETAKKEFIECLKLLEGELGEKPYFGGEKIGFVDVALVTFSCWFYAYETFGNFSIEAECPKLIAWTKRCMERESVSSSLADPHKVHGFVVVLRKKFGIE* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1091 209 SUPERFAMILY Thioredoxin-like 24 99 IPR036249 -
Vvi19g1091 209 CDD GST_C_Tau 94 202 IPR045074 GO:0004364|GO:0006749
Vvi19g1091 209 Pfam Glutathione S-transferase, C-terminal domain 106 183 IPR004046 -
Vvi19g1091 209 Gene3D - 94 209 - -
Vvi19g1091 209 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 22 101 IPR004045 -
Vvi19g1091 209 FunFam Tau class glutathione S-transferase 19 105 - -
Vvi19g1091 209 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 102 194 IPR045073 -
Vvi19g1091 209 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 78 208 IPR010987 -
Vvi19g1091 209 FunFam Glutathione S-transferase U20 88 209 - -
Vvi19g1091 209 SUPERFAMILY GST C-terminal domain-like 93 206 IPR036282 -
Vvi19g1091 209 CDD GST_N_Tau 24 95 - -
Vvi19g1091 209 Pfam Glutathione S-transferase, N-terminal domain 24 94 IPR004045 -
Vvi19g1091 209 Gene3D Glutaredoxin 20 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1091 Vvi-Chr19 16593532 16594995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1091 20 206 Glutathione S-transferase Gene Family AT1G78380 60.185 6.28e-91 264