Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1089 ATGAGCTTGTGCCACAAGTTTGCGAGTGAAGTAAAGTTTGGTTATGGAGCATCCAATGCTCTGGTTGCTTCCACGAGAGGTCATTGCTTTGATCATTCCACGTCATTGCTGTCAAACTCGCTTATCCCTTCTATTAAGGATCCAACGATCTGGAAAGTCAAGTGCATGGTTGGACGGGAGAGGCTTTCAGCTTTCTGTCTTATGAATAATTACGTTGACTTGCAGTCACTAGGAACTAAGCTGCAGATAATATCTGTTTTTTTAGTTGATCATGTAAAGGGTTGTATTTATATTGAAGCTGATAAGCAGTGTGACATTAATGAGGCATGCAAAGGTCTTTGTACTATATACACAAGCCGAGTGGCACCAGTTCCAAAAAATGAAGTTACCAAATTTATAAAATACGACAAGAAAATTTATACATCTCTTTCTATAAATATCTTGATTAAATTGGAGTTTCCATGCCCTCAATGTGGTGCTGAATATGCTGGATTCCTGTGCAACCCTAACACTGTCCACCTACAATGCCATGCATGTGGAGGAATGATGCCTTCCAGAAATGATATTGGTGTACCACAACACTGTTTAGGATGTGATCGGGCATTTTGTGGTGCTTATTGGCATACACAAAGATTTGGTGGAAGTGACTCTCATTTTGTGGTGCTCCTGGTTTGCTCACATCACCGTTTAAATGACCAAGCTTGCCTCTGCCATCTATTGCTAGCAGGAATGAAAAGAGTTGGGAAAAGCTTGTAG 756 0.4074 MSLCHKFASEVKFGYGASNALVASTRGHCFDHSTSLLSNSLIPSIKDPTIWKVKCMVGRERLSAFCLMNNYVDLQSLGTKLQIISVFLVDHVKGCIYIEADKQCDINEACKGLCTIYTSRVAPVPKNEVTKFIKYDKKIYTSLSINILIKLEFPCPQCGAEYAGFLCNPNTVHLQCHACGGMMPSRNDIGVPQHCLGCDRAFCGAYWHTQRFGGSDSHFVVLLVCSHHRLNDQACLCHLLLAGMKRVGKSL* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1089 251 Gene3D - 29 134 IPR036735 GO:0006355
Vvi19g1089 251 CDD NGN_Euk 50 134 IPR039385 -
Vvi19g1089 251 PANTHER SUPPRESSOR OF TY 5 28 138 IPR039659 GO:0006357|GO:0032784
Vvi19g1089 251 FunFam Uncharacterized protein 38 134 - -
Vvi19g1089 251 Pfam Early transcription elongation factor of RNA pol II, NGN section 50 133 IPR005100 -
Vvi19g1089 251 Pfam Cysteine rich domain with multizinc binding regions 155 213 IPR040909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1089 Vvi-Chr19 16557000 16569957 Dispersed