Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1087 ATGGTTTCCTTAATGGCACCACCTTTGAAAAGATTTTTCATATTTTTCTGTCTTACTGCTGAAGATTTGTACAATGAGGGTGCATCAGGCAGTGATGGATCTGAATATCGAACACTTTGCGATTTTCGCATTTGCCTTGTTGTTGGATTGCTCAAAATATGGGTGATAGAAAATGAGATAAGGGATTGCGTTGATGGAAATGCAACGACAATGGCGAGTGAGAATGAGGACGATGAGAAATTTGTATCCAATCTAAACAAAGATGTTATTAAACGAGTTGATGGTGGGAACTTAATGGAGATGGATAAAACCTTTCAACAATTAAAGACACATCTACTTGATATGGCTTATGGTGCAAGTAGTAGTAGTTGTGATCAAATTTTGGCTAAATTTGAGGAGAATTATACTACAGTGAAAGGTCTCTTCCTTAGGTCAAGCGGAAAACCTTTGAGAATGCACGAGGAAGGAACGAAGAATGACATGCTCTCATGCGAGAGAAGTTTGGAAGATACGAACAATATGAATGTGAATGAACATTATCTTCACACTTCGTCAAATGAGAAGTTATGCACCGAGGACTTGAATGAAAAGAATGAAGATGCATGTGCTACATCAATTGAAGTGCATATCATTCCAGACGAAAATGAAAATTTTTTACCACTTCCAATCAAAAGGAGTAGAAGAGATTATGGAAAGGAACCATTACGAGCACTATGTGGTTATCCTAATCATGTCATGAAAACACGTTCATCAAGGGAGAGGAAACCAAGTAAATTCAAGGTCTCCCCGTTTGTACAGAAATCAAGGAAGATGGTAAAACGTGACGCATCAGAGCAAATGATTTTGTGCGGGAGTCCTCATCCTGTTTTCGATAGAAAAACATCCATCGTGAGTAAGCACATTAGTGAATTGGATGATTGCGAGAAGCTATTTATTCCAATGCATGACGAATGCCCTGGTCATTGGTATCTGTGCGTCATTGACTTCAAAAACTCTTATACCCAAATTTTGGACTCATTACGATCGAAGAATTGA 1035 0.3826 MVSLMAPPLKRFFIFFCLTAEDLYNEGASGSDGSEYRTLCDFRICLVVGLLKIWVIENEIRDCVDGNATTMASENEDDEKFVSNLNKDVIKRVDGGNLMEMDKTFQQLKTHLLDMAYGASSSSCDQILAKFEENYTTVKGLFLRSSGKPLRMHEEGTKNDMLSCERSLEDTNNMNVNEHYLHTSSNEKLCTEDLNEKNEDACATSIEVHIIPDENENFLPLPIKRSRRDYGKEPLRALCGYPNHVMKTRSSRERKPSKFKVSPFVQKSRKMVKRDASEQMILCGSPHPVFDRKTSIVSKHISELDDCEKLFIPMHDECPGHWYLCVIDFKNSYTQILDSLRSKN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1087 344 Gene3D Adenoviral Proteinase; Chain A 240 344 - -
Vvi19g1087 344 Pfam Ulp1 protease family, C-terminal catalytic domain 303 342 IPR003653 GO:0006508|GO:0008234
Vvi19g1087 344 SUPERFAMILY Cysteine proteinases 298 344 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1087 Vvi-Chr19 16537696 16544504 Dispersed/Transposed