Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1072 ATGCACCTTCCCATATCTAACAATGGTTACCTCCTTTATGGCCTTCCTGGGATGGGAAAATCTACCATGATTGCTGCCATGGAGAATATGTTGTTGTACGACATCTATGATCTTGAACTAATGGTGGTCGGTGACAACACCGAGTTAAGGAAGTTGCTGATGCAGATTTCGAGCAAGTCCATCACTATGATTGAGGACATCAACTTCTTCATCGACTTGATGGGTCAGAGAAAGAAGATGAAGAAGAACAAGGCGGCCGAGGAGGAAGAGAAAGACCCCATTAAAGATAAAGCGAAGGTAGGAGACTCTGATGAAGGGAAAACTAGCAAGGTGACTTTCTCCGGGTTGTTGAACTTCATTGGTGGCCTTTGGTCTGCCTCCGAGGGGGAAAGGTTGATAGTGTTCACGACGAACTACATGGAGAAGCTCGACCCAACTCTGATTTGGCGAGGAAGGATGGACAAGCACATCGAATTATCATATTGCAACTTTGAATCATTCAAGGTACAGGCTAAGAACTATCTGGAGCTTGATTCCCACCACTTGTTCAACACGATCGAGAGGCTGTTAAGGGAAAGTAGAGTGACCCCAGTTGATGTTGTTGAGCATTTGATGCGTAAGAATATAAGTGTTGCTAATACTAAAACAAACTTGAAGAGCCTGGGTCAGGCATTGGAGATGGCTAAGGAAGAAGCAATGTTGAAGGTCAAGGAAGAAGGCAAAGAGAAGGAGTCATCTACTAGGAAAGAAGACCGATGA 759 0.4466 MHLPISNNGYLLYGLPGMGKSTMIAAMENMLLYDIYDLELMVVGDNTELRKLLMQISSKSITMIEDINFFIDLMGQRKKMKKNKAAEEEEKDPIKDKAKVGDSDEGKTSKVTFSGLLNFIGGLWSASEGERLIVFTTNYMEKLDPTLIWRGRMDKHIELSYCNFESFKVQAKNYLELDSHHLFNTIERLLRESRVTPVDVVEHLMRKNISVANTKTNLKSLGQALEMAKEEAMLKVKEEGKEKESSTRKEDR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1072 252 Gene3D - 156 225 - -
Vvi19g1072 252 PANTHER BCS1 AAA-TYPE ATPASE 8 230 - -
Vvi19g1072 252 MobiDBLite consensus disorder prediction 82 106 - -
Vvi19g1072 252 Gene3D - 2 155 IPR027417 -
Vvi19g1072 252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 206 IPR027417 -
Vvi19g1072 252 SMART AAA_5 6 163 IPR003593 GO:0016887
Vvi19g1072 252 MobiDBLite consensus disorder prediction 82 107 - -
Vvi19g1072 252 Coils Coil 211 231 - -
Vvi19g1072 252 Pfam ATPase family associated with various cellular activities (AAA) 11 160 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1072 Vvi-Chr19 16043514 16044854 Transposed