Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1064 ATGTCTGCATTTCATCTCTTCAAGCTCTCACTGCTCTTGAGTCTGCTTCCAAATTCCATCATACCCAATTCTCAAAAGAGCACGGGGTTGTTTCCACCAACGTGTAGCCGCATCGAGTGCCCCACCTACGACCTAATTCAGGCTGGAAATGGCTATGAAATTCGGCGCTATAATTCAACTGTCTGGATATCAACCTCTCCCATTCAAGATATCTCCCTTGTTGATGCCACTAGAGATAGCTTCTTACAGCTATTTGACTACATCCAAGGGAAGAACGAGTACCAAGAACATATAGAAATGACAGCTCCAGTCATCACCCAAGTCTCACCAAGTGATGGACCCTTCTGTGAATCTTCGTTTGTTGTCAGCTTCTACGTCCCTAAGAAAAATCAAGCAAACCCACCTCCGGCAAAAGGCCTCCATGTCCAAAAATGGGGGCCTGCATACGCAGCAGTGAGACAATTCAGTGGTTTCGTGTCTGACTCCGAGGTTGGAGAGGAAGCCGCGGCCCTGGAAGCCAGTCTTGCAGGCTCTATCTGGTCTGCAGCCATTGAGAAAAGCAGGCCAGATGACCCGACCTCCACATATACGGTTGCACAATACAATTCTCCATTTGAATACGAGGAGAGAGTGAACGAGATATGGATGATGTTTGATATGGAAGATGAGGTGGGTGCCCTCTGA 684 0.4781 MSAFHLFKLSLLLSLLPNSIIPNSQKSTGLFPPTCSRIECPTYDLIQAGNGYEIRRYNSTVWISTSPIQDISLVDATRDSFLQLFDYIQGKNEYQEHIEMTAPVITQVSPSDGPFCESSFVVSFYVPKKNQANPPPAKGLHVQKWGPAYAAVRQFSGFVSDSEVGEEAAALEASLAGSIWSAAIEKSRPDDPTSTYTVAQYNSPFEYEERVNEIWMMFDMEDEVGAL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1064 227 FunFam Heme-binding protein 2 38 224 - -
Vvi19g1064 227 Pfam SOUL heme-binding protein 38 216 IPR006917 -
Vvi19g1064 227 PANTHER HEME-BINDING PROTEIN-RELATED 23 222 IPR006917 -
Vvi19g1064 227 Gene3D Regulatory factor, effector binding domain 37 225 IPR011256 -
Vvi19g1064 227 SUPERFAMILY Probable bacterial effector-binding domain 30 218 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1064 Vvi-Chr19 15780101 15780978 Dispersed