Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1059 ATGGTGGTCTTGTCGAAACCAACAATTGCAGACTTCCCTCCTATCATAAACTGCAAATCCACCACATTATTCCCGGTTATTCCTACGGTGGACCTCTCAGAGCCCGACTCCAAACACCTTGTCGTGAAGTCCTGTGAAGAGTTTGGTTTCTTCAAGGTGATCAATCATGGCATCCCACTGGAGCTCATTTCAAGATTGGAAACCGAAGTCATTGAGTTCTTCTCCTTATCACTTTCTGAGAAACAAAAAGCAGGCCCTCCTGATCCGTTTGGCTATGGAAACAGGAGCATTGGGCCAAATGGGGATGTCGGCTGGGTTGAATATCTTCTCCTTACGATGAATCAGGAACGCAATTCTCAGAAACTTGCAACAATTTTTGGCAAATACCCAGAAAAGCTGTGTTCTGCATTGAATGATTATGTGTTAGCTGTTAAAAAGATGGCTTGCGAGCTTCTTGAATTAATGGCGGATGGTTTGAGAATCAAACCAAGGAATGTTTTCAGTAAGCTTTTAATGGATGAGCAGAGTGACTCTGTTTTCAGGCTAAATCACTATCCACCATATTCAGAGCTTCAAGCTTCGAATGGTAAGAATATGATTGGATTTGGAGAACACACAGACCCTCAGATCATTTCAGTTCTAAGATCCAACAACACATCTGGACTGCAAATCTCTTTGGGAAATGGAAGCTGGATTTCAGTCCCACCTGATGCCAACTCCTTCTTCATCAACGTTGGTGACTCCTTACAGGTGATGACCAATGGGAGGTTTAAAAGTGTGAGGCATAGGGTTTTGGCCAACAGCATCAAGTCAAGAATTTCAATGATATACTTTGGAGGACCACCCTTGAATGAGAAAATAGCTCCATTACCCTCGCTCGTGGAAGGAAAGGAGAGCCTCTACAAAGAATTTACGTGGTTTGAGTACAAAAGGTCTGCTTACAAGTCAAGATTGGGCGACAATAGGCTTAGCCAGTTTGAGAGGACGGCCGCCACATAG 999 0.4374 MVVLSKPTIADFPPIINCKSTTLFPVIPTVDLSEPDSKHLVVKSCEEFGFFKVINHGIPLELISRLETEVIEFFSLSLSEKQKAGPPDPFGYGNRSIGPNGDVGWVEYLLLTMNQERNSQKLATIFGKYPEKLCSALNDYVLAVKKMACELLELMADGLRIKPRNVFSKLLMDEQSDSVFRLNHYPPYSELQASNGKNMIGFGEHTDPQIISVLRSNNTSGLQISLGNGSWISVPPDANSFFINVGDSLQVMTNGRFKSVRHRVLANSIKSRISMIYFGGPPLNEKIAPLPSLVEGKESLYKEFTWFEYKRSAYKSRLGDNRLSQFERTAAT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1059 332 FunFam Gibberellin 2-beta-dioxygenase 1 6 319 - -
Vvi19g1059 332 SUPERFAMILY Clavaminate synthase-like 7 321 - -
Vvi19g1059 332 PRINTS Isopenicillin N synthase signature 41 58 - -
Vvi19g1059 332 PRINTS Isopenicillin N synthase signature 241 267 - -
Vvi19g1059 332 PRINTS Isopenicillin N synthase signature 205 226 - -
Vvi19g1059 332 Pfam non-haem dioxygenase in morphine synthesis N-terminal 27 94 IPR026992 -
Vvi19g1059 332 Pfam 2OG-Fe(II) oxygenase superfamily 177 279 IPR044861 -
Vvi19g1059 332 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 27 312 - -
Vvi19g1059 332 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 175 281 IPR005123 -
Vvi19g1059 332 Gene3D - 6 319 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1059 Vvi-Chr19 15603359 15604772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1059 27 326 Glycosyltransferase AT5G59530 29.375 4.31e-27 107