Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1058 ATGGGTGTCTTCTCTAAACCAGCAATTGAACAGTTGCCTCTCATCAGAAACTGCATGCCCTTCTCTGGAATTCCTCTCATAGACCTCTCACAACCTGACTCCAAAGCCCTCCTCATTGAAGCCTGCCAAGAGTTTGGCTTCTTCAAGGTCATCAACCATGGTGTCCCGATGGACCTCATCTCCAAGTTGGAAGCTGAAGCTATCAACTTCTTCTCACTTCCTCTCTCTGAGAAGGAAAAAGCAGGGCCTCCTAATCCTTCTGGATACGGAAACAAGAGAATTGGATCAAGCGGCGATATTGGTCGGGTTGAGTACCTTCTGCTCAATCCGCAGAGCTTCCCCTCTGTTTTTGGCCAAAACCCAGATATGTTTCGTTCAGCAGTGAGTGATTATCTATCAGCTGTGAGGAAGATGGCTTGTGAGATTCTTGAATTGTTGGCTGACGGGCTGATGATTCAACCAAGGAATGTGTTCAGTAAGCTTTTAATGGATGAACAGAGTGACTCTGTTTTCAGGCTAAATCATTATCCACCATATCCAGAACGCCAAGCTTTGAGTGGAAAGTGTATGATTGGATTTGGAGAGCACACCGACCCTCAGATCATATCTGTTTTAAGATCTAACAACACATCTGGACTGCAAATCTCTTTGAGAAATGGGAATTGGATTTCAGTTCCACCAGATGAAAACTCCTTCTTCATCAACGTTGGTGACTCCTTGCAGGTGATGACAAACGGTCGGTTTCAGAGTGTGAAGCATAGGGTGTTGACAAATAGCTGTAAATCTAGAGTTTCGATGATATACTTTGGAGGACCACCATTGAGTGAGAAAATAGCACCATTGCCCTCACTCATGGAAGGAGAGGAGAGCCATTACAAAGAGTTTACATGGTTCGAGTATAAAAGATCTGCATACAACACAAGATTGGCTGATAATAGGCTTGTGTTCTTCCAGAAAGTGGCAGCCACATGA 972 0.4444 MGVFSKPAIEQLPLIRNCMPFSGIPLIDLSQPDSKALLIEACQEFGFFKVINHGVPMDLISKLEAEAINFFSLPLSEKEKAGPPNPSGYGNKRIGSSGDIGRVEYLLLNPQSFPSVFGQNPDMFRSAVSDYLSAVRKMACEILELLADGLMIQPRNVFSKLLMDEQSDSVFRLNHYPPYPERQALSGKCMIGFGEHTDPQIISVLRSNNTSGLQISLRNGNWISVPPDENSFFINVGDSLQVMTNGRFQSVKHRVLTNSCKSRVSMIYFGGPPLSEKIAPLPSLMEGEESHYKEFTWFEYKRSAYNTRLADNRLVFFQKVAAT* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1058 323 Pfam 2OG-Fe(II) oxygenase superfamily 168 270 IPR044861 -
Vvi19g1058 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 91 IPR026992 -
Vvi19g1058 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 272 IPR005123 -
Vvi19g1058 323 Gene3D - 5 311 IPR027443 -
Vvi19g1058 323 SUPERFAMILY Clavaminate synthase-like 11 311 - -
Vvi19g1058 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 24 302 - -
Vvi19g1058 323 FunFam Gibberellin 2-beta-dioxygenase 1 6 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1058 Vvi-Chr19 15497839 15499388 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1058 3 309 Glycosyltransferase AT5G59530 26.586 1.32e-23 97.8