Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1056 ATGGATTTACAGCTAGGACATTCAATTACGGCTACATCTAGGATTTGGCAGATCCAAAACCACAAACAACCCATAAGAAGCTATTGGAGATGGAGTAGACAAGACTTCTTTCCAGAAGAGTCTTTCCAGAACTTGGCTTCATACAGAACTGCTCTTTTGCAGACGTGTTTCAGGCTCAAGGACCGCCTTCTGAGCCGATCCTCCGTTGCAAACGAGGTGTTTCTTCAACAGAGGGAGAGTGAAAACCCCTTGAAAAAGTGCCTCACCTGGTGGGACTTGGCCTGGATGAGCTTCGGCTCAGTTGTTGGGTCTGGCATATTTTTCGCAGTTGAAATACCCGTTGCAGGAGGGTCTTTCTCTTATCTTAGAGTAGAATTAGGCGACTTCGTTGCATTTCTCGTGGCCGGGAACATTCTCTTGGAGGCCATTGTTGGTGCTGCTGGTCTGGCTCGGTCTTGGTCCTCCTACTTTGCCAGTATGATCAATACAAATGCCGATTTTTTGCGAATTCGGGTGAGTCATTTAGCAAATGGTTTCAATCTGTTGGACCCAATAGCAGCCGGTGTTTTGTTAATTGCAGACGGTATAGCCATGTGCGGGACAAGGGGGACATCTATTTTGAACTGGATCAGTTCTGTGATAAGTTTTATGGTAATATTGTTTATTATTATAATTAGGTTCATTCGTGGAAAGACTTCAAATTTGGTCCCCTTCTTTCCGTATGGTGCAAGAGGGGTTTTCAGGGCTGCGGCAGTTGTGTACTGGTCCTATACCGGTTTTGACATGGTTGCGACCATGGCTGAAGAAACCAAGAATCCCACCAGAGACATACCACTAGGTTCGGTTGGTTCGATGACAATGATCACTGTTGTTTATTGCTTGATGGCCTTGGTCCTTTCCATGATGGAAAAAAACAACGAGTTAGATGTAAATGCTGCTTACGCGGTTGTGTTTGAAAGACTTGGCATGAAACGGGCTAAGTATCTTGTGAGTATATGCGCCCTCAAGGGCATGACCACGAGCTTGCTAATTGGAGGCCTTGGGCAAGCTCGATACATGACCCAGATTGCAAGAGCTCATATGATTCCACCCTGGTTTGCCCTTATTCACCCACGGACCGGAACCCCCATAAATGCAACTCTACTGGTGGCCATACCCAGTGCTACAATCGCTCTTTTCTCTAGCTTGGATGTATTGTCTAGTATTTTTTCATTCTGTACACTCTTAATCTTTTCGTTGATCGTTGTTGCATTGCTTGTGAGGCGATATTATGTGAAGGATACTACTGTGAAGCGTGATTTGGTCAAATTTCTGGCTTGTTTATTTGTTATTATTGGATCATCGATTGGAATAGCAGTGCTTTGGAATCCAAACAAGACAGGATGGATTGGATATGCAGTTGCAGCATTTATTTGGTTTCTCAGAACTTTGGGGATGGCGTTGCTTCCGAAGCAGCGAGTTGCAAATGTCTGGGGTGTTCCACTTGTCCCCTGGCTGCCATCTCTGTCAGTTGCGATGAACCTGTTTCTCGTAGGATCACTGGGTTATCAGGCATTCTTGAGGTTCGTCATTTGCAGTGCAGTAATGCTAATTTACTATCTTTTTATTGGTCTCCATGCAACTTATGATGTGGCTCACACATGGGATTTAAGGGATTTTACTGTATTCCTTGTTTTCATAGTTTATTATGTTTCCTCTTTTAGAGGAATCTATTTAGGAAGTTTAATTTTCTATATCCCATTAGTAGAGGAATGGAATTACGTTCTCTCTTTTATTTATTTTCCCTAG 1788 0.4368 MDLQLGHSITATSRIWQIQNHKQPIRSYWRWSRQDFFPEESFQNLASYRTALLQTCFRLKDRLLSRSSVANEVFLQQRESENPLKKCLTWWDLAWMSFGSVVGSGIFFAVEIPVAGGSFSYLRVELGDFVAFLVAGNILLEAIVGAAGLARSWSSYFASMINTNADFLRIRVSHLANGFNLLDPIAAGVLLIADGIAMCGTRGTSILNWISSVISFMVILFIIIIRFIRGKTSNLVPFFPYGARGVFRAAAVVYWSYTGFDMVATMAEETKNPTRDIPLGSVGSMTMITVVYCLMALVLSMMEKNNELDVNAAYAVVFERLGMKRAKYLVSICALKGMTTSLLIGGLGQARYMTQIARAHMIPPWFALIHPRTGTPINATLLVAIPSATIALFSSLDVLSSIFSFCTLLIFSLIVVALLVRRYYVKDTTVKRDLVKFLACLFVIIGSSIGIAVLWNPNKTGWIGYAVAAFIWFLRTLGMALLPKQRVANVWGVPLVPWLPSLSVAMNLFLVGSLGYQAFLRFVICSAVMLIYYLFIGLHATYDVAHTWDLRDFTVFLVFIVYYVSSFRGIYLGSLIFYIPLVEEWNYVLSFIYFP* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1056 595 Gene3D Amino acid/polyamine transporter I 84 479 - -
Vvi19g1056 595 Pfam Amino acid permease 112 462 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi19g1056 595 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 108 542 - -
Vvi19g1056 595 Pfam C-terminus of AA_permease 491 540 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1056 Vvi-Chr19 15403004 15406589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1056 26 546 Organic Solute Cotransporters AT1G17120 65.827 0.0 727