Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1051 ATGGGTTATGGAGGTGGCCACAAGTCTGGTGCATTAAGAGACTGCATCACTTGGGGCAAGGGCTTTCAATACCTATGGGGATTACCCTTGTGTCTGACAGGCAACCGGCTTAATGGAAATATTCCAGATGGAATCAAGGGAAGGCAGAGCCGCACGAACTTGTTCAGAAGCTTTTCTGAGGAGGGGAACTTGGGGATCAATATGAAGGAGGTGCAGCAAAATTTCATCCTGACTGATGATTGGGGATTTAGTAGCACTGGACACTTCTGGGATCATAACAGAACCATAAATGATTACATAGCACAAAATGTATCCGTACTTGGAATGAACCACTCTGGATTGTACACCAAAGCACGACTTTCTCCTCTATCTTTTACTTACTATGGGCGCTGCTTAGCAGATGGGAACTATACAGTAAAAATTCACTTTGCAGAGATAATTATCAGAGGCAATAAATCCTTTCATAGCCTTGGCAGACAGATTTTTAATGTTTATATTCAGGGAAAGTTGGAATCGGAGGATTTTGATATTGTACCAGCAGCACAAGGGGTTGAAAAGGTAGTTGTAAAAGAATTTAAAGCAGTTGTGAAGAATAAAACTTTAGAGGTCCGCTTTCATTGGGCTGGCAAGGGGACAACAGCTATACCAAGCAGAGGAACTTATGGTCCTCTCATATCAGCTATTTCTATGGAATCTGGTGAGTTTAGACCTTATTCATTCCTAAAGCTTGACAAATTCCATATGGAACAAATGGAAGAAGAGGTTACCGCAAGAAATGCCCACATACATCAACAGAAAGTTGGTAGTTTGGAATGTTTTATGGTAGCTAAGAGCAGTGCAGAAGAATTTTCAAAAACTGATATTGTTGAAGTTGTTGACTTGAGGAAAATGTCTCTTAGTTTCAAAATTACATTGAAAGTGGTTTTAATGCATGACTTCATTATAAGATATAATGTCATGGCACCTACGCTTGGACTAGTCTCTTATTTACCCATATTGGAGACATACTTCATTAATAACCTAGCAAGAGTAAGGAGTTTGCAACTGGAACTCAAGTCTCGCATTGAGGAGTTTGAGAAGCTTGACAAATTCCATATGGAACAAATAGAAGAAGAGGTTACTGCAAGAAATGCCCACATACATCAACAAAAAGTTGGTAGCTTGGAATGTTTTATGGTAGCTAAGAGCAGTGCAGAAGAATTTTCAAAAACTGATATTGTTGAAGGTATGTGCATTAGTCCTTTGCTTTACTTGATTTGA 1260 0.3937 MGYGGGHKSGALRDCITWGKGFQYLWGLPLCLTGNRLNGNIPDGIKGRQSRTNLFRSFSEEGNLGINMKEVQQNFILTDDWGFSSTGHFWDHNRTINDYIAQNVSVLGMNHSGLYTKARLSPLSFTYYGRCLADGNYTVKIHFAEIIIRGNKSFHSLGRQIFNVYIQGKLESEDFDIVPAAQGVEKVVVKEFKAVVKNKTLEVRFHWAGKGTTAIPSRGTYGPLISAISMESGEFRPYSFLKLDKFHMEQMEEEVTARNAHIHQQKVGSLECFMVAKSSAEEFSKTDIVEVVDLRKMSLSFKITLKVVLMHDFIIRYNVMAPTLGLVSYLPILETYFINNLARVRSLQLELKSRIEEFEKLDKFHMEQIEEEVTARNAHIHQQKVGSLECFMVAKSSAEEFSKTDIVEGMCISPLLYLI* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1051 419 Pfam Malectin domain 99 228 IPR021720 -
Vvi19g1051 419 PANTHER MALECTIN DOMAIN-CONTAINING PROTEIN 240 290 - -
Vvi19g1051 419 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 60 233 - -
Vvi19g1051 419 Gene3D - 65 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1051 Vvi-Chr19 15301187 15306241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1051 81 237 Receptor kinase-like Gene Family AT1G07650 49.689 3.70e-46 168