Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1049 ATGCAATGTTATGTTGTCCTTAATATAATTTTAATTGCAGTACCACCCATCAAGCACATCCAAGAAACAAAAACAATGCATACTCTGACTCTTGAATTGCTTAACCACGTATGTACTGAAGTTTTGAAAGTGTCAAGAGCAAAGGAAATATTTAGACAATCATTCATTAATGGGGCAAAATATGGGATTCCCGAGATTCTGGAAGAGATTATAAAGTCATATCCTTTTGCACTCGAGTATCTGGATGAGGATCTATTCAAATTGGTAGTATTAAATCGTTATGAAAAGATTTTCAACCTCATCTGCGAAACTGGTATGCATAGACAACTTATAATACGAACCAGAGATGATACAAATAACGATAATATCTTGCATTTGGCTGGAAAATTGGCCCCTCCGCACCGGCTCAGTCTCGTTTCTGGTGCAGCTCTACAAATGCAACGCGAGTTACATTGGTTTAAGGAAATTGAAAAATATGCACCGAGAGCCTTCAGTGAATCTGAGAACGAAAACAAAGATAAACCGAAAATGGCATTTATAAAGGAACATGAAAATTTGATAAAAGAAGGGGAGAAATGGATGAAAGGCACAGCAAAATTTTACACATTGGCGGCAGCGCTTATTGCTACTGTAGTGTTTGCAGCTGCAATTACCATCCCGGGTGGCAACCATGATGATACTGGCATACGAAATTTCTCCAAAGAAATTGCCTTCAAAGTTTTTGCAGTTTCGGATGCGCTTTCCCTCTTCCTATCCATTGCTTCGGTGCTGATATGCCTATCCATTCTCACGGCACGATATGCAGAAGATGATTTTCTTTTTGCCCTTCCCAGGAGGTTGATATTTGGCCTTGTTACTCTATTCCTCTCCGTAACATTCATGATGATAGCCTACAGTGGCGCAATCTATCTTCTCTTTGGTGAAAAGAAGGCATGGATTCTTATTGCCTTGGCTGCATTAGCCTGTTTTCCAGTGACCTTGTACGGAAATTTGCAGTTTCCCCTCCTTGTGGAACTGATTTATTCCACATACGGCCCAGGCATTTTTGGCAAACATAGTAATCGTCTGATCCGATAG 1077 0.4011 MQCYVVLNIILIAVPPIKHIQETKTMHTLTLELLNHVCTEVLKVSRAKEIFRQSFINGAKYGIPEILEEIIKSYPFALEYLDEDLFKLVVLNRYEKIFNLICETGMHRQLIIRTRDDTNNDNILHLAGKLAPPHRLSLVSGAALQMQRELHWFKEIEKYAPRAFSESENENKDKPKMAFIKEHENLIKEGEKWMKGTAKFYTLAAALIATVVFAAAITIPGGNHDDTGIRNFSKEIAFKVFAVSDALSLFLSIASVLICLSILTARYAEDDFLFALPRRLIFGLVTLFLSVTFMMIAYSGAIYLLFGEKKAWILIALAALACFPVTLYGNLQFPLLVELIYSTYGPGIFGKHSNRLIR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1049 358 PANTHER CASKIN 24 345 - -
Vvi19g1049 358 Pfam Domain of unknown function 191 304 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1049 Vvi-Chr19 15226726 15227891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1049 202 321 Miscellaneous Gene Families AT5G54710 29.600 9.15e-10 58.2