Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1048 ATGAAGCATAGCTCAGTTGCAATTTCTTTTGGGTTCCTTACTGTGCTCATAAGCTGTTTATGGAGGCTACTGAATTGGGTGTGGTTGAGGCCAAAGAGGTTAGAAAGATGCCTTAGAGAGCAAGGCCTGGCTGGGAATTCTTATAGGCTTTTACATGGGGACTTTAAAGAGATGTCCATGATGTTAAAAGAAGCATATTCAAGACCAATCAGCCTCTCCGATGATATTGCTCCGCGTGTCCTGCCCTTCCATTGTCATTTCATTAAGAAATACGGTAAAAATTTCTTTGCATGGTTCGGTCCAAATCCAATGGTAAACATTATGGAGCCTGAGCTAATAAGGGATATTTTGTTAAAGTCCAATGTCTTTCAAAAGCCACCCCCACACCCACTTGGCAAGTTGCTGGTTTCTGGTCTGGTGACCTTGGAAGGCGAACGATGGGCTAAACGTAGAAAGAACATCAACCCAGCTTTCCATCTAGAAAAGTTGAAGAATATGTTGCCGGCATTTCATTTGAGTTGTAGCGACATGGTGACCAAATGGAAAATGCTTTCGGTGGGGGGATCATGTGAGTTGGATGTTTGGCCCTATCTTGAAAATTTGACAGGGGATGTGATTTCTCGGACAGCATTTGGTAGTAGTTATGAAGAAGGAAGAAGGATATTCCAGCTCCAGAAAGAACAAACACATCTTGCAATCCAGGTTACAATGTCAGTTTATATCCCGGGATGGAGGTTTTTACCCACAAAGACGAACAGGAGGATGAAGCAAATAAGCAAAGAAGTATATGCATTGTTGAGGGGTATCGTTAACAAAAGGGAGAAGGCAATGAAGGCTGGCGAAACTGCTAATAGTGACTTATTAGGTATACTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACAAGAAGATTGGAATGAGTGTCAGAGATGTCATTGAAGAGTGTAAGCTATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTGCTTGTATGGACAATGGTCCTGCTAAGCGAGCATCCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAACCGGAAGCTGATGGATTAAATCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATACCCACCAATAGCAATGCTTGCTAGAGCTGTTTATAAGGACACTCAAGTGGGAGACATGTGTTTTCCAGCTGGAGTGCAAGTCCGCCCACCATCCTAG 1254 0.4203 MKHSSVAISFGFLTVLISCLWRLLNWVWLRPKRLERCLREQGLAGNSYRLLHGDFKEMSMMLKEAYSRPISLSDDIAPRVLPFHCHFIKKYGKNFFAWFGPNPMVNIMEPELIRDILLKSNVFQKPPPHPLGKLLVSGLVTLEGERWAKRRKNINPAFHLEKLKNMLPAFHLSCSDMVTKWKMLSVGGSCELDVWPYLENLTGDVISRTAFGSSYEEGRRIFQLQKEQTHLAIQVTMSVYIPGWRFLPTKTNRRMKQISKEVYALLRGIVNKREKAMKAGETANSDLLGILMESNFREIQEHQNNKKIGMSVRDVIEECKLFYLAGQETTSVLLVWTMVLLSEHPNWQARAREEVLQVFGNKKPEADGLNHLKIVTMIFHEVLRLYPPIAMLARAVYKDTQVGDMCFPAGVQVRPPS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1048 417 Gene3D Cytochrome P450 36 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vvi19g1048 417 Pfam Cytochrome P450 86 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 SUPERFAMILY Cytochrome P450 79 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1048 417 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1048 Vvi-Chr19 15177252 15182340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1048 4 416 Cytochrome P450 AT3G14690 55.663 2.07e-170 486