Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1045 ATGACAACAGTAACATCGACATTGCTGAGCATGATGAGGAGTGTACTGCAATGGCTTCCTCTTCATTACCATCTCGGTAATGATGACAGCCCAAACAATGCTTCAGTCTCTTCCTCTTCATCTTTGCAAAGGACTAGCAGCTCCGAATTCGATCGCTTGGAACTGTACAAAGCTGCGCTCAATGGTGACTGGGAAAGTACTTCACAATTATTGGTGCATAATCCACGATTATTCTCCGCCCGGTTCGGAACAGATGATTCCCCAGTGCTTCACATAGCAGTTGAGTTAGGAGAGGCCAGAATGGGTTTCGTGGAGAATTTGGTTGAGTTTATGGGAAGTGAGGATCTGGCTCTGCGGGATTCTGATGGCGCCACTGCCCTTTTCAACGCTGCAAGGGCTGGCAATATAAAAGCAGTCAAGTTGTTAGAGAACAAAAACCCAAGGTTGCCCAATATCTGCAACCGCTACGATTTTGCGCCTCTTCACACCGCTGTTAAGTATGGTCATAAAGAGCTGACTTTATATTTATTAAGCGTCACCAGAGATAATGAACCTCCATATCCTTTCTCAAATTCACCTGGAATCGAGCTTCTGCGCAGAGCACTAATGGTGGGGTTTCATGATGTAGCACTGTATCTGGTTGAACGTTATCCTCACCTTGCCACATGCCATTTCGATTCCGCCCCCCACAATGATGCTAATGATTCTGATGAGGATTTTACCCCTTTGACAGTATTGGCTAAAAGGCCTTGGGCTTTCCGAAGTGGAAGTCGCTTCAACTTATGGCAACTCATAATATATCACTGTTAG 810 0.4556 MTTVTSTLLSMMRSVLQWLPLHYHLGNDDSPNNASVSSSSSLQRTSSSEFDRLELYKAALNGDWESTSQLLVHNPRLFSARFGTDDSPVLHIAVELGEARMGFVENLVEFMGSEDLALRDSDGATALFNAARAGNIKAVKLLENKNPRLPNICNRYDFAPLHTAVKYGHKELTLYLLSVTRDNEPPYPFSNSPGIELLRRALMVGFHDVALYLVERYPHLATCHFDSAPHNDANDSDEDFTPLTVLAKRPWAFRSGSRFNLWQLIIYHC* 270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1045 269 SMART ANK_2a 156 187 IPR002110 GO:0005515
Vvi19g1045 269 SMART ANK_2a 122 152 IPR002110 GO:0005515
Vvi19g1045 269 SMART ANK_2a 85 118 IPR002110 GO:0005515
Vvi19g1045 269 SUPERFAMILY Ankyrin repeat 55 222 IPR036770 -
Vvi19g1045 269 Gene3D - 25 265 IPR036770 -
Vvi19g1045 269 Pfam Ankyrin repeats (3 copies) 55 143 IPR002110 GO:0005515
Vvi19g1045 269 PANTHER - 37 190 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g1045 Vvi-Chr19 15124187 15125527 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1045 90 222 Miscellaneous Gene Families AT5G60070 27.820 8.67e-06 44.7