Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1044 ATGCCCCAACTCATATATATTGTTTTTCTAACTTTACAACTATTTATTCCAATGCATGACGATTGCCCCGGTCATTGGTATCTATGCATCATTGACTTAAAAAACTCTCATATCCAAATTTTGAATTCATTGCGATTGAAAAGTCGGGACGAGTTTCGGTTTAAGAGTGTCAAAACAGTGGTTGAATTTTGTCAAACGTTCTTCAAACTGTATGACATAGGGAAAGATGTCTTCCAATTATCCATTGATTGGGATCCTTCGATTCCGACCCAATATAATGGGTGGGACTGTGGAGTGCATGTCATTAAACATATGTAG 318 0.3711 MPQLIYIVFLTLQLFIPMHDDCPGHWYLCIIDLKNSHIQILNSLRLKSRDEFRFKSVKTVVEFCQTFFKLYDIGKDVFQLSIDWDPSIPTQYNGWDCGVHVIKHM* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1044 105 Pfam Ulp1 protease family, C-terminal catalytic domain 14 103 IPR003653 GO:0006508|GO:0008234
Vvi19g1044 105 Gene3D Adenoviral Proteinase; Chain A 8 105 - -
Vvi19g1044 105 SUPERFAMILY Cysteine proteinases 14 105 IPR038765 -
Vvi19g1044 105 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 14 105 - -
Vvi19g1044 105 ProSiteProfiles Ubiquitin-like protease family profile. 1 105 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1044 Vvi-Chr19 15094001 15094493 Transposed