Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1043 ATGGAGCTTATCTCAGTTGCAATTTCCTTTGCTTTTATTACTCTCCTAATATATGCATGGAGACTATTGAATTGGGTGTGGTTGAGACCAAAGAAGCTAGAAAGGTGTCTTCGGCAGCAAGGTATAACGGGAAATTCCTACAGATTGTTACATGGGGATGTTAGAGAGATGTTAAGGATGATTAGCGAAGCAAATTCAAGACCCATCAGCTTATCCGATGAGATCGTACAGCGAGTTCTCCCCTTCCATTATCATTCCCTCAAGAAATATGGTAAAAATTATTTTATATGGATGGGCCCAAAACCAGTGGTAAACATTATGGACCCTGAGTTGATAAGGGATGTTTTCTTGAGGTACAATGCCTTTCACAAACCAGCTCCGCACCCGCTTGGCAAGCTGCTGGCTACTGGTCTTGTTACATTGGAAGGTGAACAATGGACTAAACATAGAAAGATCATAAACCCAGCTTTCCATCTAGAAAAGTTGAAGCACATGGTACCCGCATTCCAATTGAGTTGTGGTGACATGGTAAATAAATGGGAGAAGAAGCTCTCCAAGGACGGCTCATGTGAATTGGACATTTGGCCCGATCTTGAAAATTTGACAGGAGATGCGATTTCTAGAACAGCATTTGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTCCAGAAAGAGCAAGCACATCTTGCAGTCAAGGTTTTCCGGTCAGTTTATATTCCTGGATGGAGGTTTGTTCCAACAAAGACAAACAAGAGAATAAGGCAAATTAGGAATGAACTCCATGCATTGTTAAAAGGCATCATCGAGAAAAGAGAGAAGGCAATGTTGGTTGGTGAAACTGCTAATGATGATTTATTAAGTCTACTAATGGAATCCAACTTCAGAGAAATGCAAGAACATGATGAGAGGAAAAATGTTGGAATGAGCATCGATGATGTCATTGAGGAGTGTAAGCTATTCTACTTTGCTGGCCAAGAGACTACCTCGGATTTACTTCTGTGGACAATGATTCTATTAAGCAAGCATTCAAATTGGCAAGCTCGTGCAAGAGAAGAGATTTTACAAGTTTTTGGCAATAAAAAACCAGATGGCAATGGCTTAAATCACCTCAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGTATCTATGCTCATTCGAACTGTTTTTGTGGACAGCCAAGTGGGGCGATGGTATTTTCCAGTTGGATCGCATGTCGCTTTGCCAATCCTCCTAATTCACCATGATCATGAAATTTGGGGAGAGGATGCAAAAGAATTCAACCCCGAGAGATTTTCTGAAGGAGTTTCTAAGGCAACAAAGGGCGGCCAATTTGCCTTTTTTCCATTTGGTTATGGTCCTCGGGCGTGCATTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTACAGCGTTTCTCATTTGAACTTTCCCCATCTTATGCTCATGCACCTTTTAATGTTATAACTGTACAACCCCAATATGGTGCACACCTGATTTTACATGGACTTTAG 1551 0.4081 MELISVAISFAFITLLIYAWRLLNWVWLRPKKLERCLRQQGITGNSYRLLHGDVREMLRMISEANSRPISLSDEIVQRVLPFHYHSLKKYGKNYFIWMGPKPVVNIMDPELIRDVFLRYNAFHKPAPHPLGKLLATGLVTLEGEQWTKHRKIINPAFHLEKLKHMVPAFQLSCGDMVNKWEKKLSKDGSCELDIWPDLENLTGDAISRTAFGSSYEEGRRIFQLQKEQAHLAVKVFRSVYIPGWRFVPTKTNKRIRQIRNELHALLKGIIEKREKAMLVGETANDDLLSLLMESNFREMQEHDERKNVGMSIDDVIEECKLFYFAGQETTSDLLLWTMILLSKHSNWQARAREEILQVFGNKKPDGNGLNHLKIVTMIFHEVLRLYPPVSMLIRTVFVDSQVGRWYFPVGSHVALPILLIHHDHEIWGEDAKEFNPERFSEGVSKATKGGQFAFFPFGYGPRACIGQNFAMMEAKMALAMILQRFSFELSPSYAHAPFNVITVQPQYGAHLILHGL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1043 516 Gene3D Cytochrome P450 73 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 509 - -
Vvi19g1043 516 Pfam Cytochrome P450 88 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 SUPERFAMILY Cytochrome P450 78 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 FunFam Cytochrome P450 734A1 27 516 - -
Vvi19g1043 516 CDD CYP72 80 512 - -
Vvi19g1043 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1043 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1043 Vvi-Chr19 15084320 15088852 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1043 1 516 Cytochrome P450 AT3G14690 53.772 0.0 612