Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1042 ATGGGGTTGTCCGACCCTTGGAATGAGGATGAAGATTGGTTCTTCGATGACGAAGATTCTGATATAGAAGAGAAAAAAGAATCTCTTCTTACCAAATGTCAAGGAAAAGGTGCTGATTTTGTTCGTGCAGCACAGGAGATTATTGATAGTTATGAGGAGTTGAAGAAACAGGATCAAGTTGATGATTTTAACTCTGCCATTGATGTTGCTGTGACAAATAGTGAGAATTTAGTGGACTCATCATCTAATTCTGGGTTGAAGGATCAGCCTGAAGCCCCCACAGTAGCAGTCAATTCAAGATTAAAAACTTCATATTCTGCCGAGGATAGAAGTGAACCAAAGCTGCTTGAGAAAGTCCAGAATGAGTTGCTGTCAGTATTTGCAAACCAACTACTTGAGAAGGAGCACTCTGGGTGCCATGCGTTACTTAGAGATGACAAGGTGGATAATTTATCAAGGAAAACCAAAATAGGAAGGAAGTGGCCACACAGCACGCATATAGTGGGCTGTAAGGGAGATTCCTTTGGGTTTTTTTTCGAAAGAAAAGTCAACTGA 555 0.409 MGLSDPWNEDEDWFFDDEDSDIEEKKESLLTKCQGKGADFVRAAQEIIDSYEELKKQDQVDDFNSAIDVAVTNSENLVDSSSNSGLKDQPEAPTVAVNSRLKTSYSAEDRSEPKLLEKVQNELLSVFANQLLEKEHSGCHALLRDDKVDNLSRKTKIGRKWPHSTHIVGCKGDSFGFFFERKVN* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1042 184 Gene3D Cullin Repeats 98 167 - -
Vvi19g1042 184 PANTHER CULLIN 104 159 IPR045093 -
Vvi19g1042 184 SUPERFAMILY Cullin repeat-like 109 156 IPR016159 -
Vvi19g1042 184 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1042 Vvi-Chr19 15078884 15079488 Dispersed/Transposed