Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1038 ATGGGGAGAGGAATTCTAGAGAAGGAACAGACGACAGGAAGGGCACACTGTTTTTTAGCATGCTGGGTACGAGGTGCTGTTTCGGTGCCCACTTCATCAAGACTTGGTCCATTGTTCAAATCAAAGTCCCTAGATGCATTCACTTCACCATTGGAAAACCCACCAGATAATGATGACCTATTAGGCAATGGTGGAGCATCTGATCTACAACCATTGCTCACAGAAAACAGCCCAATATCAGGACTTTCATCAACTCTGTTTAAATCAAGTCCCAGCCCTAAAAGCGGTACGAAGTGGGGGTTGTTTTCCAGCGGTAGCAACACCTCCACGCCTAGGATGCAGTCTCAACCTGTTTCCAGTCCCAGCTTGCGCTGCCGAACCACTGTGGTAGTGGCTCAAACACCTTCCATCGACGAGAGTCCCAAACTTCAAGCCAAAACCACTACGCCCACCGACACCGTCAAAACCCCGAGATCGCTACTGAGCTCGAACCCGTCTTCTCCTAGGTCCCCTCTAAAGTTATCCATCTTCAGAAACAGTTTCAAGCTTCGGAATAGCTATGGAATCTGCTTGCAAAGCGTGAAGACTGGTCAAGGAACAACCATTTACACAGCAGAGTGCTCGCACGCCTTTCACTTCTCCTGCATAGCAGCTCACGTTAGAAAGCAAGGAAGCCTCGTGTGCCCAGTCTGCAACACCACCTGGAAAGACGAGCCTTTACTCATGATCCATAAGAACCGAAAGCCAGAAGAAGACGAGGTTTCGCATCGGGAACACGAAGAAATGGCACAGGCGGTTGTGTCTAATGGGAAGAGAGAAGACGACACGACCATGGGACCCACCAAACAATGTTCATTGGGTTAA 864 0.4931 MGRGILEKEQTTGRAHCFLACWVRGAVSVPTSSRLGPLFKSKSLDAFTSPLENPPDNDDLLGNGGASDLQPLLTENSPISGLSSTLFKSSPSPKSGTKWGLFSSGSNTSTPRMQSQPVSSPSLRCRTTVVVAQTPSIDESPKLQAKTTTPTDTVKTPRSLLSSNPSSPRSPLKLSIFRNSFKLRNSYGICLQSVKTGQGTTIYTAECSHAFHFSCIAAHVRKQGSLVCPVCNTTWKDEPLLMIHKNRKPEEDEVSHREHEEMAQAVVSNGKREDDTTMGPTKQCSLG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1038 287 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 186 259 - -
Vvi19g1038 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 242 IPR013083 -
Vvi19g1038 287 ProSiteProfiles Zinc finger RING-type profile. 189 232 IPR001841 -
Vvi19g1038 287 MobiDBLite consensus disorder prediction 248 268 - -
Vvi19g1038 287 MobiDBLite consensus disorder prediction 69 168 - -
Vvi19g1038 287 SMART ring_2 188 231 IPR001841 -
Vvi19g1038 287 MobiDBLite consensus disorder prediction 49 168 - -
Vvi19g1038 287 MobiDBLite consensus disorder prediction 248 287 - -
Vvi19g1038 287 SUPERFAMILY RING/U-box 189 236 - -
Vvi19g1038 287 Pfam RING-like zinc finger 189 216 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1038 Vvi-Chr19 14961012 14961875 Dispersed/Transposed