Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1036 ATGGAAATGAAGCAGCTGAACTTAGTTGCCTTATCCTTTGCTTTCATCACTATCCTAATATATGCATGGAGGGTACTGAATTGGATGTGGTTGAGGCCGAAAAGGCTAGAGAGGTGCCTTAAACAGCAAGGCCTGGCTGGAAATTCTTACAGGCTGTTGTATGGGGACTTCAAAGAAATGTCCATGATGATAAAAGAAGCAACTTCAAGACCCATCAGCATCTCCGATGATATTGTGCAACGTGTCGCACCCTTTCATTACCATTCCATCAAGAAATATGGTAAAAGTTCTTTTATATGGATGGGCCCAAAACCAAGGGTCAACATTATGGAGCCTGAACTGATAAGGGATGTTTTGTCCATGCACACTGTCTTCCGAAAGCCAAGGGTTCATGCACTTGTGAAGCTGCTTGTTTCTGGACTACTTTTTTTGGATGGTGAGAAATGGGCTAAACATAGAAAGATCATAAACCCCGCATTCCGACTAGAAAAACTGAAGAACATGTTACCCGCATTTCATTTGAGCTGTAGCGACATGATAAGCAAATGGGAGGGGAAGCTCTCAACAGAGGGGTCATGTGAGTTGGATGTTTGGCCCTATCTTCAAAATTTGACAGGCGATGCGATTTCGCGGACAGCATTTGGTAGTAACTATGAAGAAGGAAGAATGATATTCGAACTGCAGAGAGAGCAAGCGCAACTTTTGGTCCAGTTCTCAGAGTCAGCTTTCATTCCAGGATGGCGGTTTTTGCCTACAAAATCCAATAAGAGGATGAAGCAAATTAGAAAAGAAGTAAATGCATTGTTGTGGGGTATTATCGACAAAAGAGGGAAGGCAATGAAGGCTGGCGAAACTCTTAATGATGACTTATTAGGTATACTACTGGAATCCAATTTTAAAGAAATTCAAGAGCATGAAAATGACAAGAACGTTGGAATGAGTATCAAAGATGTCATTGAGGAGTGTAAGCTATTTTACTTTGCCGGTCAAGAGACTACCTCAGTTCTGCTTCTATGGACAATGGTTCTATTAAGCAAACATCCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACATGTTTTTGGCAACAACAAACCCGAAGGAGATGGACTAAATCACCTTAAAATTGTTATGATGATTCTTCATGAGGTTCTTAGGCTATATCCACCGGTCCCCTTGCTTGCTCGAACTGTTTATGAGGACATCCAAGTAGGAGACATGTATTTACCTGCTGGAGTGGATGTCTCCTTACCAACAATCCTGGTACATCATGATCATGAAATTTGGGGAGAAGATGCAAGGGAGTTCAATCCAGAGAGGTTCTCCCAAGGAGTTTTGAAGGCAACGAAAAGTCCAGTTTCATTCTTCCCCTTTGGTTGGGGTTCTCGATTATGCATTGGACAAAACTTTGCAATATTGGAAGCTAAAATGGTGCTTGCAATGATCCTACAGCGCTTCTCATTCAGCCTTTCACCATCCTATTCTCATGCTCCTTGTAGTCTTGTTACTTTGAAACCACAATATGGGGCACACTTGATTTTACATGGGATCTAG 1557 0.42 MEMKQLNLVALSFAFITILIYAWRVLNWMWLRPKRLERCLKQQGLAGNSYRLLYGDFKEMSMMIKEATSRPISISDDIVQRVAPFHYHSIKKYGKSSFIWMGPKPRVNIMEPELIRDVLSMHTVFRKPRVHALVKLLVSGLLFLDGEKWAKHRKIINPAFRLEKLKNMLPAFHLSCSDMISKWEGKLSTEGSCELDVWPYLQNLTGDAISRTAFGSNYEEGRMIFELQREQAQLLVQFSESAFIPGWRFLPTKSNKRMKQIRKEVNALLWGIIDKRGKAMKAGETLNDDLLGILLESNFKEIQEHENDKNVGMSIKDVIEECKLFYFAGQETTSVLLLWTMVLLSKHPNWQARAREEVLHVFGNNKPEGDGLNHLKIVMMILHEVLRLYPPVPLLARTVYEDIQVGDMYLPAGVDVSLPTILVHHDHEIWGEDAREFNPERFSQGVLKATKSPVSFFPFGWGSRLCIGQNFAILEAKMVLAMILQRFSFSLSPSYSHAPCSLVTLKPQYGAHLILHGI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1036 518 CDD CYP72 84 514 - -
Vvi19g1036 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Vvi19g1036 518 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 Gene3D Cytochrome P450 79 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 SUPERFAMILY Cytochrome P450 81 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 Pfam Cytochrome P450 91 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1036 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 511 - -
Vvi19g1036 518 FunFam Cytochrome P450 734A1 30 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1036 Vvi-Chr19 14902448 14923796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1036 9 518 Cytochrome P450 AT3G14690 55.186 0.0 612