Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1031 ATGAGCGAAGAATCCAAGAACAGAAGCGATCAGCACTACGGAACCTTCCAGGGTGTTCCCACCTACTCTCAGCCGCCGGCCGTAGGCTTCCCTCAGCCAGTCCCTCCGCCAGGGGCTGCCGAGCCCTCCGCTCCGCCTCCGCCTCCTCCTCAGTACTATGCTCATGGCTACCAAGCCGTTCCAGGTTATGCGGTTGCTGAAGGAACACCTGTAAGAGAGCGTCGCCTTCCTTGCTGTGGCATTGGTCTTGGCTGGTTCCTGTTCATCATTGGCTTCTTCCTTGCTGCTGTCCCCTGGTATGTTGGGTTCTTCCTTCTACTTTGTGCCAGAGTAGACTACAGAGAGAAACCAGGCTACATTGCCTGCACAATTGCTGCTATTCTCGCCACAATTGCTATTATTTTTGGAGTAACAAAGGGAACAGGTGAGTAG 432 0.5417 MSEESKNRSDQHYGTFQGVPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAEGTPVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGYIACTIAAILATIAIIFGVTKGTGE* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1031 143 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 6 141 IPR044804 -
Vvi19g1031 143 MobiDBLite consensus disorder prediction 1 50 - -
Vvi19g1031 143 MobiDBLite consensus disorder prediction 26 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1031 Vvi-Chr19 14642844 14652148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1031 3 138 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.514 1.05e-26 97.4