Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1030 ATGTTCAAAGCCCTTCATCACTCCATATGCTGGCGTGCCGCCATCCCTTCCACTTTACTTCACTCTAAATCCTTTCTTCTGGGATCTCAAATGGGCTTGTCTACCACCTCGTCTCATATGTCTAAGCTCCTCTTTCGCCAGCTTTTCGAGAAGGAGTCTTCTACTTATACCTATCTCTTGGCTGATGTCTCTCACCCTGATAAGCCTGCCCTCTTGATTGACCCAGTAGACAGGACTGTGGATAGAGATCTCTCTCTTGTTAAAGATTTAGGGCTGAAGCTCATATATGCTATAAACACCCATGTGCATGCTGATCATATCACTGGAACTGGCCTAATTAAGACTAAAGCTCCAGCTGTGAAATCAATTATTTCAAAAGCCAGCAATTCAAAAGCCGATATTCTGGTTCAATCTGGTGATAAAATCTACTTTGGTGATCTTTTCCTGGAGGTTCGAGCTACTCCTGGACATACAGTAGGTTGTGTTACCTATGTTACAGGAGAGGGACCTGAACAACCTCAACCGAGGATGGCATTCACAGGAGATGCGGTATTGATACGAGGATGTGGAAGGACAGATTTCCAGGGAGGAAGTTCGGAGACCCTCTACAAGTCAGTGCATTCACAGATATTCACATTACCAAAGGATGCATTGATATATCCTGCTCATGACTACAGAGGTTTCACTGTGAGTACCGTGGGGGAGGAGATGCTCTACAATCCTCGCTTAACAAAGGATGAGGAAACATTCAAGAACATCATGGCAAATCTTAATCTGGCCTACCCAAAGATGATAGACATTGCAGTCCCTGCAAATATGGTATGTGGTTTTCAGGATCCGACTCCCAACAAAGCCTGCTGA 861 0.4472 MFKALHHSICWRAAIPSTLLHSKSFLLGSQMGLSTTSSHMSKLLFRQLFEKESSTYTYLLADVSHPDKPALLIDPVDRTVDRDLSLVKDLGLKLIYAINTHVHADHITGTGLIKTKAPAVKSIISKASNSKADILVQSGDKIYFGDLFLEVRATPGHTVGCVTYVTGEGPEQPQPRMAFTGDAVLIRGCGRTDFQGGSSETLYKSVHSQIFTLPKDALIYPAHDYRGFTVSTVGEEMLYNPRLTKDEETFKNIMANLNLAYPKMIDIAVPANMVCGFQDPTPNKAC* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1030 286 SMART Lactamase_B_5a 54 223 IPR001279 -
Vvi19g1030 286 Pfam Metallo-beta-lactamase superfamily 54 223 IPR001279 -
Vvi19g1030 286 SUPERFAMILY Metallo-hydrolase/oxidoreductase 54 270 IPR036866 -
Vvi19g1030 286 Gene3D - 44 272 IPR036866 -
Vvi19g1030 286 FunFam Persulfide dioxygenase ETHE1, mitochondrial 40 277 - -
Vvi19g1030 286 PANTHER PERSULFIDE DIOXYGENASE ETHE1 34 281 - -
Vvi19g1030 286 CDD POD-like_MBL-fold 44 225 IPR044528 GO:0006749|GO:0050313
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1030 Vvi-Chr19 14613380 14617833 Dispersed