Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1014 ATGTCGGAAGATTTTTTAGAGTTTCTGAGGAATAAATTCATTGATGGCTTAGCGGAAGCAGAGGATCAAGGGAGGCAACTGCCTATGCATCGTCAATTTCAAGGGATTCGGGGCGTTTTTCTTAGAAAGGACATCACCTCATCCACGCCTACCCAAATGATCCAAATGAGGAATACGCTCTACCGGCTCCTCGCTGTGTACACCGACTGCCTCATCTTCTCGGAGAAGCATCCAATCCCAAGCACCAAGTTTCTCTTGCCTTTCTACAATCTCTTCCACTTCTGGTTTCTCAAAAGCACCAAGGAGGTGCTGGGGCGAATCAAGGGAGATCTTGGTCTGTATCCGTGCATAGAAGACTCCAATGGCTCACCCGATCATAGTGAGGATCAAGAAAGTCAAAGTCATGATCCAGAAAATCAAAGTCAAATTTGGTATCCTCATGTGTCGGAGATACGAGGTTTTGATAGACAATTCTCAAAAATCCGAAATTGGCTTCTGCAATCTGATGAGGGATTCAAGGACATTGCAATTGTTGGGATTGGAGGTTCAGGCAAGACAGCTCTTGCCCGACAACTTTTTTATGACGAACATATTCAGGGTGCCTTTTTCCCCACACTTTGGATCAGCTTATCAGGAAAGATTGATGCAGACATAGACTTAAAGCAAGTTGTGAAAGACATGTTAGTGGAGTTGACTGCTGAGCATGGACATGAAAAGAGTTGTAGCACTGAGGAGCCGTTGTCCTCCCTGGGCCGTCGGTTGTTGGGTAAAAAGTACTTGATTGTGCTTGATGGCATATGGGATGAAACCAGAGATTGGTATTTCAGTCTAGGCCAGGCATTGAACTGGCCTGATAGGGACTGCAATATCCAATTTGGTAGAGACCAGAAAAGAAATGGGAATACAGTTATCATTACTACTAGACTTGAGGAAGTGGGAAAAGGGATGGTGGGTGATAAGTATCTGCATAGCATGGAAGGCATTGGTAAGGATGAGATTTGGTCCATATTCGATGATGCAGTTGATAAAAGCAAATTGAATCCTCAACAGAATGATAAATTGAAGAAATTGCAAAACGAAATTGTGAAACAGTGTGATGGCTTCCCTCTAGGTGTGAAGACATTAGCTGAGATCATTCCAGGCGCATTGACTAAGGATCATTCCGGTGTCGATGCAGAACCAGAGAGGGGACACATTGACTCAGATCATTACAGTGCCACACAGAACCATAGAGGGGACACATTGACTGAGATCATTCCAATGGAGGTCCAGATTGATGGAGGGGGGTAA 1290 0.445 MSEDFLEFLRNKFIDGLAEAEDQGRQLPMHRQFQGIRGVFLRKDITSSTPTQMIQMRNTLYRLLAVYTDCLIFSEKHPIPSTKFLLPFYNLFHFWFLKSTKEVLGRIKGDLGLYPCIEDSNGSPDHSEDQESQSHDPENQSQIWYPHVSEIRGFDRQFSKIRNWLLQSDEGFKDIAIVGIGGSGKTALARQLFYDEHIQGAFFPTLWISLSGKIDADIDLKQVVKDMLVELTAEHGHEKSCSTEEPLSSLGRRLLGKKYLIVLDGIWDETRDWYFSLGQALNWPDRDCNIQFGRDQKRNGNTVIITTRLEEVGKGMVGDKYLHSMEGIGKDEIWSIFDDAVDKSKLNPQQNDKLKKLQNEIVKQCDGFPLGVKTLAEIIPGALTKDHSGVDAEPERGHIDSDHYSATQNHRGDTLTEIIPMEVQIDGGG* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1014 429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 379 IPR027417 -
Vvi19g1014 429 Gene3D - 143 327 IPR027417 -
Vvi19g1014 429 MobiDBLite consensus disorder prediction 386 408 - -
Vvi19g1014 429 MobiDBLite consensus disorder prediction 120 140 - -
Vvi19g1014 429 Gene3D - 328 389 IPR042197 -
Vvi19g1014 429 PANTHER DISEASE RESISTANCE PROTEIN RP 137 378 IPR044974 GO:0006952
Vvi19g1014 429 PRINTS Disease resistance protein signature 253 267 - -
Vvi19g1014 429 PRINTS Disease resistance protein signature 365 379 - -
Vvi19g1014 429 PRINTS Disease resistance protein signature 174 189 - -
Vvi19g1014 429 MobiDBLite consensus disorder prediction 388 407 - -
Vvi19g1014 429 Pfam NB-ARC domain 158 378 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1014 Vvi-Chr19 13656601 13657890 Dispersed/Transposed