Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1012 ATGAGGCAAATTAGCAATGAAGTCAATGCATTGTTAAAAGGCAGCATTGAGAGAAGAGAGAAGGCAATGAAGGTTGGCGAAATGCGAGAACATGATGAAAGGAAGAATGTTGGAATGAGTAACAAGGATGTCATCAAGGAGTGTAAGCTTTTCTACTTCGCTGGCCAAGAGACTACCTCGGTTTTACTTCTGTGGACAATGGTTCCATTAAGCAAGCATTCAAACTGGCAAGGTCGTGCAAGAGAAGAGGTTTTACAAGTTTTTGGCAATAAAAAACCAGATGGTGATGGTTTAAATCACCTTAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGCATCCATGATCTGTTTATGCTGA 375 0.3947 MRQISNEVNALLKGSIERREKAMKVGEMREHDERKNVGMSNKDVIKECKLFYFAGQETTSVLLLWTMVPLSKHSNWQGRAREEVLQVFGNKKPDGDGLNHLKIVTMIFHEVLRLYPPASMICLC* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1012 124 Pfam Cytochrome P450 30 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1012 124 Gene3D Cytochrome P450 1 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1012 124 PRINTS P450 superfamily signature 106 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1012 124 PRINTS P450 superfamily signature 54 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1012 124 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 121 - -
Vvi19g1012 124 SUPERFAMILY Cytochrome P450 2 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1012 Vvi-Chr19 13644027 13644948 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1012 1 121 Cytochrome P450 AT3G14610 56.391 5.95e-44 148