Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1010 ATGAAGCTTAGCTCAGTTGCAGTTTCCTTTGCTTTTATTACTCTCCTCATATTTGCATGGAGGTTATTGAATTGGGTGTGGTTGAGACCAAAGAAGCTAGAGAGATGCCTTAGGAAGCAAGGTCTGACTGGAAATTCCTACAGGTTGTTGCATGGGGATTTTAGAGAGATGTCGAGGATGAATAACGAAGCAAATTCCGGACCCATCAGCTTCTCTGATGATATTGTGAAGCGAGTTCTACCATTTTTTAATCATTCCATCCAGAAATATGGTAAAAATAGTTTTACATGGTTGGGCCCAAAACCAGTAGTAAATATTATGGAGCCTGAGCTGATAAGGGATGTTCTCTTAAAGCACAATGTCTTTCAAAAACCACCGCCGCACCCTCTCGGCAAGCTGCTGGCTACTGGTGTTGTTGCATTGGAAGGTGAACAATGGACTAAACGTAGAAAGATCATAAACCCAGCTTTCCATCTAGAGAAGTTGAAGCACATGGTATCGGCATTCCAATTGAGTTGTAGTGATATGGTCAATAAATGGGAGAAGAAGCTCTCCATGGACGACTCATGTGAATTGGACATTTGGCCCTATCTTCAAATTTTGACGGGAGATGTTATTTCAAGAACAGCATTTGGTAGTAGCTACGAGGAAGGAAGAAGGATATTCCAACTCCAGAAAGAGCAAGCACATCTTGTAGCCCAGGTTACTCAGTCAGTTTATGTTCCAGGATGGAGGTTTTTCCCAACAAAGATAAACAGGAGAATGAGGCAAATTAGAAATGAAGTCAATGCATTGTTGAAGGGTATCATTGAGAAAAGAGAGAAGGCAATGAAAGTTGGCGAAACTGCTAATCATGATTTATTAGGTCTGCTAATGGAATCCAACTACAGAGAAATGCAAGAAAATGATGAGAGGAAGAATGTTGGAATGAGCATCAAAGATGTCATTGAGGAGTGTAAGCTATTCTACTTTGCCGGCCAAGAGACTACCTCAGTTTTACTTCTGTGGACAATGGTTCTATTAAGCAAGCATTCAAACTGGCAAGCTCGTGCAAGGGAAGAGGTTTTACAAGTTTTTGGTAATAAAAAACCAGATGGCGATGGCTTAAATCACCTCAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGCATCCATGCTCATACGAACTGTTTTTGCCGACAGCCAAGTGGGAGGATTGTATTTATCAGATGGAGTGCTGATCGCTTTGCCAATCCTCCTAATTCACCACAATCATGAAATTTGGGGAGAGGATGCAAAGGAATTCAACCCGGGAAGATTTTCAGAAGGAGTTTCTAAGGCAGCAAAGACCCAAGTTTCATTTTTTCCATTTGGTTATGGTCCTCGGATATGCGTTGGACAAAATTTTGCAATGATGGAAGCGAAAATGGCTTTGGCAATGATCTTACAACGTTTCTCATTTGACCTTTCCCCATCCTATGCTCATGCACCTAGTAGCCTTTTAATGCAACCCCAACATGGTGCACACCTGATTTTACATGGACTTTAG 1545 0.4123 MKLSSVAVSFAFITLLIFAWRLLNWVWLRPKKLERCLRKQGLTGNSYRLLHGDFREMSRMNNEANSGPISFSDDIVKRVLPFFNHSIQKYGKNSFTWLGPKPVVNIMEPELIRDVLLKHNVFQKPPPHPLGKLLATGVVALEGEQWTKRRKIINPAFHLEKLKHMVSAFQLSCSDMVNKWEKKLSMDDSCELDIWPYLQILTGDVISRTAFGSSYEEGRRIFQLQKEQAHLVAQVTQSVYVPGWRFFPTKINRRMRQIRNEVNALLKGIIEKREKAMKVGETANHDLLGLLMESNYREMQENDERKNVGMSIKDVIEECKLFYFAGQETTSVLLLWTMVLLSKHSNWQARAREEVLQVFGNKKPDGDGLNHLKIVTMIFHEVLRLYPPASMLIRTVFADSQVGGLYLSDGVLIALPILLIHHNHEIWGEDAKEFNPGRFSEGVSKAAKTQVSFFPFGYGPRICVGQNFAMMEAKMALAMILQRFSFDLSPSYAHAPSSLLMQPQHGAHLILHGL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1010 514 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 CDD CYP72 80 510 - -
Vvi19g1010 514 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 FunFam Cytochrome P450 734A1 27 514 - -
Vvi19g1010 514 Pfam Cytochrome P450 82 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 Gene3D Cytochrome P450 27 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g1010 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 507 - -
Vvi19g1010 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vvi19g1010 514 SUPERFAMILY Cytochrome P450 77 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1010 Vvi-Chr19 13603264 13607320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1010 1 514 Cytochrome P450 AT3G14690 53.295 0.0 590