Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1003 ATGGCAGACGAGATTATTTTGCTGGACTTCTGGCCGAGCATGTTTGGTATGAAGGTCAGAATTGCACTAGCAGAGAAGGGTCTCAAATATGAATACAGAGATGAGGACTTGTTCAACAAGGGCCCTCTACTTCTAGAGATGAACCCAATTCATAAGAAAATCCCAGTGCTGATCCATAATGGTAAACCCATTTGTGAGTCTCAGATAATAGTTCAGTATATTGATGAGGTTTGGAAGGATAAATCTCCGTTATTGCCCTCGGATCAATACCATAGAGCTCAAGCAAGGTTCTGGGCTGACTACATAGACAAGAAGATAAGTTCGATAGAAATGCAGCAGAAAGGGGCATTCTTCTACCCATAA 363 0.4187 MADEIILLDFWPSMFGMKVRIALAEKGLKYEYRDEDLFNKGPLLLEMNPIHKKIPVLIHNGKPICESQIIVQYIDEVWKDKSPLLPSDQYHRAQARFWADYIDKKISSIEMQQKGAFFYP* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1003 120 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Vvi19g1003 120 Gene3D - 85 116 - -
Vvi19g1003 120 FunFam Tau class glutathione S-transferase 1 87 - -
Vvi19g1003 120 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vvi19g1003 120 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi19g1003 120 Gene3D Glutaredoxin 1 84 - -
Vvi19g1003 120 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 109 IPR045073 -
Vvi19g1003 120 SFLD Glutathione Transferase (cytosolic) 7 108 IPR040079 -
Vvi19g1003 120 SFLD Main (cytGST) 7 108 - -
Vvi19g1003 120 CDD GST_N_Tau 5 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1003 Vvi-Chr19 13260144 13260661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1003 1 106 Glutathione S-transferase Gene Family AT1G17180 72.642 5.97e-58 177