Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1002 ATGAGCCCAACACCATCAGAAGAATCTATTGAACAAGAAAGTTCTCAGCAGAATGTGAAGAAGGTATCATGTACCCTTGTTCTCACATTGGATTATCAAAGTCTTGGGGTGGTTTATGGTGACTTCAGTACCTTCCCTCTCTATGTCTACAAGACGACCTTCTCCGGGAAGTCGAGCCTTCATGGGAATGATGAAGAGATTTATGGGGTGCATACATTTTCAAGAGAAATGTCATAG 237 0.4219 MSPTPSEESIEQESSQQNVKKVSCTLVLTLDYQSLGVVYGDFSTFPLYVYKTTFSGKSSLHGNDEEIYGVHTFSREMS* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1002 78 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 17 72 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi19g1002 78 Pfam K+ potassium transporter 32 70 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1002 Vvi-Chr19 13249350 13249586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g1002 12 73 Inorganic Solute Cotransporters AT1G70300 56.452 1.52e-14 64.7