Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0998 ATGAAGCTTAGCTCAGTTGCAATCTCCTTTGTTTTTATTACTCTCTTGATATATGCATGGAGGTTATTGAATTGGGTGTGGTTGAGACCAAAGAAGCTAGAGAGATGCCTTAGGCAGCAAGGTCTGACTGGGAATTCCTACAGGTTGTTGCATGGGGACTTTAGAGAGATGTCGAGAATGATTAACGAAGCAAATTCCAGACCCATCAGCTTCTCTGATGATATTGTGCAGCGAGTTCTACCATTTCACGATCATTCCATCCAGAAATATGGTAAAAATAATTTTATATGGTTGGGCCCAAAACCAGTGGTAAACATTATGCAGCCTGAGCTGATTAGGGATGTTCTCTTAAAGCACAATGCTTTTCAAAAACCGCCGCGTCACCCTCTCGGCAAGCTGCTGGCTTCAGGTGTTGCGTCATTGGAAGGTGAACAATGGACTAAGCGTAGAAAGATCATAAACCCAGCTTTCCATCTAGAAAAGCTGAAGCACATGGTATCGGCATTCCAATTGAGTTGTAGTGATATGGTCAATAAATGGGAGAAGCAGCTCTCCCTGGACGGCTCATGTGAATTGGACATTTGGCCCTATCTTCAAAATTTGACGGGAGATGTTATTTCAAGAACAGCATTCGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTCCAGAAAGAGCAAGCACTACTTACAGTCCAGGTTACTCGGTCAGTTTATGTTCCAGGATGGAGGTTTTTTCCAACAAAGACAAACAGGAGAATGAGGCAAATTAGCAGTGAAGTCGATGCATTGTTGAAGGGTATCATTGAGAAAAGAGAGAAGGCAATGCAAGCTGGCGAAACTGCTAATGATGATTTATTAGGTCTACTAATGGAATCCAACTACAGAGAAATGCAAGAAAATGATGAGAGGAAGAATGTCGGAATGAGCATCAAAGATGTCATTGAGGAGTGTAAGCTATTCTACCTTGCTGGCCAAGAGACTACCTCGGCTTTACTTCTGTGGACAATGGTTCTATTAAGCAAGCATTCAAACTGGCAAGCTCGAGCAAGGGAAGAGGTTTTACGGGTTTTTGGTAATAAAAAACCAGATGGCGATGGCTTAAATCACCTCAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGCACCCATGCTCACACGAGCTGTTTTTGCCGACAGCCAAGTGGGAGGATTGTATTTACCAGATGGAGTGCAGATCGCTTTGCCAATCCTCCTAATTCACCACGATGATAAAATTTGGGGAGACGATGCAAAGGAATTCAACCCGGGGAGATTTTCAGAAGGAGTTTCAAAGGCAGCAAAGAGCCAAGTTTCATTTTTTCCATTTGGTTATGGTCCTCGGATATGCGTTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTACAACGTTTCTCATTTGAACTTTCCCCATCCTATGCTCATGCACCTATTAGTCTTCTAACTATGCAACCCCAACATGGTGCACATCTGATTTTACATGGACTTTAG 1548 0.4238 MKLSSVAISFVFITLLIYAWRLLNWVWLRPKKLERCLRQQGLTGNSYRLLHGDFREMSRMINEANSRPISFSDDIVQRVLPFHDHSIQKYGKNNFIWLGPKPVVNIMQPELIRDVLLKHNAFQKPPRHPLGKLLASGVASLEGEQWTKRRKIINPAFHLEKLKHMVSAFQLSCSDMVNKWEKQLSLDGSCELDIWPYLQNLTGDVISRTAFGSSYEEGRRIFQLQKEQALLTVQVTRSVYVPGWRFFPTKTNRRMRQISSEVDALLKGIIEKREKAMQAGETANDDLLGLLMESNYREMQENDERKNVGMSIKDVIEECKLFYLAGQETTSALLLWTMVLLSKHSNWQARAREEVLRVFGNKKPDGDGLNHLKIVTMIFHEVLRLYPPAPMLTRAVFADSQVGGLYLPDGVQIALPILLIHHDDKIWGDDAKEFNPGRFSEGVSKAAKSQVSFFPFGYGPRICVGQNFAMMEAKMALAMILQRFSFELSPSYAHAPISLLTMQPQHGAHLILHGL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0998 515 CDD CYP72 80 511 - -
Vvi19g0998 515 Gene3D Cytochrome P450 74 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 SUPERFAMILY Cytochrome P450 78 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 508 - -
Vvi19g0998 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vvi19g0998 515 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 Pfam Cytochrome P450 88 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0998 515 FunFam Cytochrome P450 734A1 27 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0998 Vvi-Chr19 13198362 13202257 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0998 1 515 Cytochrome P450 AT3G14690 55.233 0.0 620