Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0990 ATGGCAGACGAGATTATCTTGTTGGATTTCTGGCCTAGCATGTTTGGTATGAGGGTCAGACTTGCCCTGGCAGAGAAGGGTCTCAAGTATGAATATAGAGAGGAGGACCTGTGGAAGAAGAGCCCTTTGCTTCTTGAGATGAACCCAGTTCATAAGAAAATCCCAGTTCTGATCCACAATGGAAAGCCCATTTGTGAGTCTCTGATAATAGTTCAGTATATTGATGAGGTTTGGTGCGATAAATCTCCGCTTTTGCCTAGTGACCCATACCAGAGAGCTCAGGCCAGGTTCTGGGCGGACTACATAGACAAGAAGATGCAATTTCTTGAAGGCTTCTTTAATAGACTTCACAACCTCCCAATTCTTTCATTTCTTGCTAACAACATTAAGGTTTTTCCTTTCCTTCCATGTTTTTGTTGTCGCGATCACCACCGCAAAGGAGATCGAATGGATAGTTTTTGCAAGCAACATGACATGCATAGTGACAAATAA 492 0.4289 MADEIILLDFWPSMFGMRVRLALAEKGLKYEYREEDLWKKSPLLLEMNPVHKKIPVLIHNGKPICESLIIVQYIDEVWCDKSPLLPSDPYQRAQARFWADYIDKKMQFLEGFFNRLHNLPILSFLANNIKVFPFLPCFCCRDHHRKGDRMDSFCKQHDMHSDK* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0990 163 SFLD Glutathione Transferase (cytosolic) 2 107 IPR040079 -
Vvi19g0990 163 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 107 IPR045073 -
Vvi19g0990 163 FunFam Tau class glutathione S-transferase 1 87 - -
Vvi19g0990 163 SFLD Main.3: Omega- and Tau-like 2 107 IPR045073 -
Vvi19g0990 163 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi19g0990 163 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vvi19g0990 163 Gene3D - 85 118 - -
Vvi19g0990 163 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vvi19g0990 163 Gene3D Glutaredoxin 1 84 - -
Vvi19g0990 163 FunFam Uncharacterized protein 85 118 - -
Vvi19g0990 163 CDD GST_N_Tau 5 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0990 Vvi-Chr19 13001509 13011867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0990 1 106 Glutathione S-transferase Gene Family AT1G17180 78.302 3.67e-61 187