Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0987 ATGATTAACGAAGCAAATTCCAGACCCATCAGCTTCTCTGATGATATTGTGCAGCGAGTTCTACCATTTCACGATCATTCCATCCAGAAATATGGTAAAAATAGTTTTACATGGTTGGGCCCAAAACCAGTGGTAAACATTATGGAGCCTGAGCTGATAAGGGATGTTTTCTTAAAGCACAATGCCTTCCAAAAAGTACCGCCACACCCTCTCGGCAAGCTGCTGGCCACTGGTGTTGTTGCATTGGAAGGTGAACAATGGACTAAACGTAGAAAGATCATAAACCCAGCTTTCCATCTAGAGAAGTTGAAGCACATGGTATCGGCATTCCAATTGAGTTGTAGTGATATGGTCAATAAATGGGAGAAGAAGCTCTCCCTGGACGGCTCATGTGAATTGGACGTTTGGCCCTATCTTGAAAATTTGGCGGGAGATGTGATTTCTAGAACTGCATTTGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTTCAGAGAGAGCAAGCACATCTTGCAATCCAGGTTACTCGGTCAATCTATGTTCCCGGATGGAGGTTTTTCCCAACAAAGACAAACAGGAGAATGAGGCAAATTAGCAATGAAGTCAATGCATTGTTGAAGGGTATCATTGAGAAAAGAGAGAAGGCAATGAAAGTTGGCGAAACTGCTAATCATGATTTATTAGGTCTACTAATGGAATCCAACTACAGAGATATGCAAGAAAATGATGAGAGGAAGAATGTTGGAATGAGCATCAAAGATGTCATTGAGGAGTGTAAGCTATTCTACCTTGCTGGCCAAGAGACTACCTCGGTTTTACTTCTGTGGACGATGGTTCTATTAAGCAAGCATTCAAACTGGCAAACTCGCGCAAGGGAAGAGGTTTTACGGGTTTTTGGTAATAAAAAACCAGATGGTGATGGCTTAAATCACCTCAAAATTGTTACTATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGTGTCCATGCTTCTTCGAACTGTTTTTGCCGACAGCCAAGTGGGAGGATTGTATTTACCAGATGGAGTGCAGATTGCTTTGCCAATCCTCCTACTTCACCACGATCATGAAATTTGGGGAGAGGATGCAAAGGAATTCAACCCGGGGAGATTTTCAGAAGGAGTTTCTAAGGCAGCAAAGACCCAAGTTTCATTTTTTCCATTTGGTTATGGTCCTCGGATATGCGTTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTACAACGTTTCTCATTTGAACTTTCCCCATCCTATGCTCATGCACCTATTAGTCTTATAACTATGCAACCCCAGTATGGTGCACACCTGATTTTACATGGACTTTAG 1371 0.4194 MINEANSRPISFSDDIVQRVLPFHDHSIQKYGKNSFTWLGPKPVVNIMEPELIRDVFLKHNAFQKVPPHPLGKLLATGVVALEGEQWTKRRKIINPAFHLEKLKHMVSAFQLSCSDMVNKWEKKLSLDGSCELDVWPYLENLAGDVISRTAFGSSYEEGRRIFQLQREQAHLAIQVTRSIYVPGWRFFPTKTNRRMRQISNEVNALLKGIIEKREKAMKVGETANHDLLGLLMESNYRDMQENDERKNVGMSIKDVIEECKLFYLAGQETTSVLLLWTMVLLSKHSNWQTRAREEVLRVFGNKKPDGDGLNHLKIVTMIFHEVLRLYPPVSMLLRTVFADSQVGGLYLPDGVQIALPILLLHHDHEIWGEDAKEFNPGRFSEGVSKAAKTQVSFFPFGYGPRICVGQNFAMMEAKMALAMILQRFSFELSPSYAHAPISLITMQPQYGAHLILHGL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0987 456 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS E-class P450 group I signature 142 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS E-class P450 group I signature 28 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS E-class P450 group I signature 317 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS P450 superfamily signature 318 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 Pfam Cytochrome P450 29 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 449 - -
Vvi19g0987 456 CDD CYP72 21 452 - -
Vvi19g0987 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Vvi19g0987 456 SUPERFAMILY Cytochrome P450 19 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 Gene3D Cytochrome P450 16 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0987 456 FunFam Cytochrome P450 734A1 1 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0987 Vvi-Chr19 12924346 12928065 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0987 1 456 Cytochrome P450 AT3G14690 56.674 0.0 565