Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0985 ATGGCAGACGAGATTATCTTGTTGGATTTCTGGCCTAGCATGTTTGGTATGAGGGTCAGACTTGCCCTGGCAGAGAAGGGCCTCAAGTATGAATATAGACAGGAGGACTTGAGGAACAAGAGCCCTCTGCTGCTTGAGATGAACCCAGTTCATAAGAAAATCCCGGTTCTGATCCACAATGGAAAGCCCATTTGTGAGTCTCTGATAATAGTTCAGTATATTGATGAGGTTTGGAAGGATAAATCTCCATTGTTGCCTAGTGACCCATACCAGAGAGCTCAGGCCAGGTTCTGGGCGGACTACGTAGACAAGAAGCTCTATGAACTTGGAGGGAAGATATGGTCAACCAAAGGAGAAGAGCAGGAAACAGGCAAGAAGGAATTCATAGAGTGCCTCAAGCTTTTGGAAGGAGAGCTTGGAGAGAAGCCTTACTTCGGGGGTGAAAAAATTGGGTTTGTGGATGTGGCCCTGGTGACCTTCTCTTGCTGGTTTTATGCATACGAGACCTTTGGCAACTTCAGCATAGAGGCGGAGTGCCCCAAGTTGGTAGCTTGGACCAAGAGGTGCATGGAAAAGGAGAGCGTGTCGTCTTCTCTGGAAGACCCACACAAGGTCCATGGCTTTATCATGGGGATGAGAAAGAGGTTTGGTATAGAGGTCAGACTTGCCCTGGCAGAGAAGGGCCTCAAGTATGAATATAAAGAGGAGGACCTTAGGAATAAGAGCCCTCTGCTTCTTGAGATGAATCCAGTTCATAAGAAAATCCCGGTTCTGATCCACAATGGAAAGCCCATTTGTGAGTCTCTGATAATAGTTCAGTATATTGATGAGGTTTGGCACGATAAATCTCCGCTTTTGCCTAGTGACCCATACCAGAGAGCTCAGGCCAGGTTCTGGGCGGACTACGTAGACAAGAAGGGATTTGTCCAAAATGCTGGGTTCTTCTTCACACATTCTCTTCCCAAGGCACCATCATCATCATAG 984 0.4715 MADEIILLDFWPSMFGMRVRLALAEKGLKYEYRQEDLRNKSPLLLEMNPVHKKIPVLIHNGKPICESLIIVQYIDEVWKDKSPLLPSDPYQRAQARFWADYVDKKLYELGGKIWSTKGEEQETGKKEFIECLKLLEGELGEKPYFGGEKIGFVDVALVTFSCWFYAYETFGNFSIEAECPKLVAWTKRCMEKESVSSSLEDPHKVHGFIMGMRKRFGIEVRLALAEKGLKYEYKEEDLRNKSPLLLEMNPVHKKIPVLIHNGKPICESLIIVQYIDEVWHDKSPLLPSDPYQRAQARFWADYVDKKGFVQNAGFFFTHSLPKAPSSS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0985 327 Gene3D - 286 321 - -
Vvi19g0985 327 Gene3D Glutaredoxin 213 285 - -
Vvi19g0985 327 Gene3D - 88 212 - -
Vvi19g0985 327 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 204 IPR045073 -
Vvi19g0985 327 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Vvi19g0985 327 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Vvi19g0985 327 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 204 283 IPR004045 -
Vvi19g0985 327 CDD GST_N_Tau 204 279 - -
Vvi19g0985 327 Gene3D Glutaredoxin 1 87 - -
Vvi19g0985 327 FunFam Tau class glutathione S-transferase 203 288 - -
Vvi19g0985 327 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Vvi19g0985 327 CDD GST_N_Tau 5 78 - -
Vvi19g0985 327 FunFam Glutathione S-transferase U20 88 219 - -
Vvi19g0985 327 SUPERFAMILY Thioredoxin-like 216 305 IPR036249 -
Vvi19g0985 327 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Vvi19g0985 327 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi19g0985 327 Pfam Glutathione S-transferase, N-terminal domain 216 277 IPR004045 -
Vvi19g0985 327 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vvi19g0985 327 FunFam Tau class glutathione S-transferase 1 87 - -
Vvi19g0985 327 Pfam Glutathione S-transferase, C-terminal domain 116 192 IPR004046 -
Vvi19g0985 327 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Vvi19g0985 327 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0985 Vvi-Chr19 12824413 12829165 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0985 216 306 Glutathione S-transferase Gene Family AT1G78380 75.824 1.85e-46 155