Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0977 ATGTCGAGAATGATTAACGAAGCAAATTCCAGACCCATCAGCTTCTCTGATGATATTGTGCAGCGAGTTCTACCATTTCACGATCATTCCATCCAGAAATATGGTAAAAATAATTTTATATGGTTGGGCCCAAAACCAGTGGTAAACATTATGCAGCCTGAGCTGATTAGCGATGTTCTCTTAAAGCACAATGCTTTTCAAAAAGCGCCGCGGCACCCTCTCCGCAAGCTGCTGGCTTCAGGTATTGCGTCATTGGAAGGTGAACAATGGACTAAGCGTAGAAAGATCATAAACCCAGCTTTCCATCTAGAAAAGCTGAAGCACATGGTATCGGCATTCCAATTGAGTTGTAGTGATATGGTCAATAAATGGGAGAAGCAGCTCTCCCTGGACGGCTCATGTGAATTGGACATTTGGCCCTATCTTCAAAATTTGACGGGAGATGTTATTTCAAGAACAGCATTCGGTAGTAGCTATGAGGAAGGAAGAAGGATATTCCAACTCCAGAAAGAGCAAGCACTACTTGCAGTCCAGGTTACTCGGTCAGTTTATGTTCCAGGATGGAGGTTTTTTCCAACAAAGACAAACAGGAGAATGAGGCAAATTAGCAGTGAAGTCGATGCATTGTTGAAGGGTATCATTGAGAAAAGAGAGAAGGCAATGCAAGCTGGCGAAACTGCTAATGATGATTTATTAGGTCTACTAATGGAATCCAACTACAGAGAAATGCAAGAAAATGATGAGAGGAAGAATGTCGGAATGAGCATCAAAGATGTCATTGAGGAGTGTAAGCTATTCTACCTTGCTGGCCAAGAGACTACCTCGGTTTTACTTCTGTGGACAATGGTTCTATTAAGCAAACATTCAAACTGGCAAGCTTGCGCAAGGGAAGAGGTTTTACGGGTTTTTGGTAATAAAAAACCAGATGGCGATGACTTAAATCACCTCAAAATTGTTACAATGATTTTTCATGAGGTCCTTAGGTTATATCCACCAGTACCCATGCTCACACGAGCTGTTTTTGCCGACAGCCAAGTGGGAGGATTGTATTTACCAGATGGAGTGCAGATCGCTTTGCCAATCCTCCTAATTCACCACGATGATAAAATTTGGGGAGAGGATGCAAAGGAATTCAACCCGGGGAGATTTTCAGAAGGAGTTTCAAAGGCAGCAAAGAGCCAAGTTTCATTTTTTCCATTTGGTTATGGTCCTCGGATATGCGTTGGACAAAATTTTGCAATGATGGAAGCAAAAATGGCTTTGGCAATGATCTTACAACGTTTCTCATTTGAACTTTCCCCATCCTATGCTCATGCACCTATTAGTCTTCTAACTATGCAACCCCAACATGGTGCACACCTGATTTTACATGGACTTTAG 1380 0.4217 MSRMINEANSRPISFSDDIVQRVLPFHDHSIQKYGKNNFIWLGPKPVVNIMQPELISDVLLKHNAFQKAPRHPLRKLLASGIASLEGEQWTKRRKIINPAFHLEKLKHMVSAFQLSCSDMVNKWEKQLSLDGSCELDIWPYLQNLTGDVISRTAFGSSYEEGRRIFQLQKEQALLAVQVTRSVYVPGWRFFPTKTNRRMRQISSEVDALLKGIIEKREKAMQAGETANDDLLGLLMESNYREMQENDERKNVGMSIKDVIEECKLFYLAGQETTSVLLLWTMVLLSKHSNWQACAREEVLRVFGNKKPDGDDLNHLKIVTMIFHEVLRLYPPVPMLTRAVFADSQVGGLYLPDGVQIALPILLIHHDDKIWGEDAKEFNPGRFSEGVSKAAKSQVSFFPFGYGPRICVGQNFAMMEAKMALAMILQRFSFELSPSYAHAPISLLTMQPQHGAHLILHGL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0977 459 PRINTS E-class P450 group I signature 31 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS E-class P450 group I signature 361 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS E-class P450 group I signature 145 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS E-class P450 group I signature 278 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS E-class P450 group I signature 258 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS E-class P450 group I signature 397 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS E-class P450 group I signature 407 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 Gene3D Cytochrome P450 19 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 CDD CYP72 24 455 - -
Vvi19g0977 459 FunFam Cytochrome P450 734A1 1 459 - -
Vvi19g0977 459 SUPERFAMILY Cytochrome P450 22 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 452 - -
Vvi19g0977 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 400 409 IPR017972 GO:0005506|GO:0016705
Vvi19g0977 459 Pfam Cytochrome P450 32 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS P450 superfamily signature 269 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS P450 superfamily signature 398 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0977 459 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0977 Vvi-Chr19 12608202 12612007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0977 4 459 Cytochrome P450 AT3G14610 58.952 0.0 565