Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0975 ATGTCGGAAGATTTTTTAGAGTTTCTGAGGAATAAATTCATTGATGGCTTAGCGGAAGCAGAGGATCAAGGGAGGCAACTGCCTACGCATCGTCAATTTCAAAGGATTCGGGGCGTTTTGCTTAGAAAGGACATCACCTCATCCACGCCTATCCAAATGATCCAAATGAGGAATACGCTCTACCGGCTCCTCGCTGTGTACACCGACTGCCTCATCTTCTCAGAGAAGCACCCAATCCCAAGCACCAAGTTTCTCTTGCCTTTCTACAATCTCTTCCACTTCTGGTTTCTCAAAAGCACCAAGGAGGAGCTGGTGCGAATCAAGAGAGAGCTTGGTCTGTATCCGTGCATAGAAGACTCCAATGGCTCACCCGATCATAGTGAGGATCAAGAAAGTCAAAGTCATGATCCAGAAAATCAAAGTCAAATTTGGTATCCTCATGTGTCGGAGATACGAGGTTTTGATAGACAATTCTCAAAAATCCGAAATTGGCTTCTGCAATCTGATGAGGGATTCAAGGACATTGCAATTGTTGGGATTGGAGGTTCAGGCAAGACAGCTCTTGCCCGACAACTTTTTTATGACGAACATATTCAGGGTGCCTTTTTCCCCACACTTTGGATCAGCTTATCAGGAAAGATTGATGCAGACATAGACTTAAATCAAGTTGTGGAAGACATGTTAGTGGAGTTGACTACTGAGCATGGACATGAAAAGTTAAGGAGCTGTAGCACTGAGGAGCCGTTGTCCTCCCTTGGCCGTCGGTTGTTGGGTAAAAAGTACTTGATTGTGCTTGATGGCATATGGGATGAAACCAGAGATTGGTATTTCAGTCTAGGCCAGGCATTGAACTGGCCTGATAGGGACTGCAATATCCAATTTGGTAGAGACCAGAAAAGAAATGGGAATGCAGTTATCATTACTACTAGACTTGAGGAAGTGGCCAAAGGGATGGTGGGTGATAAGTATCTGCATAGCATGGAAGGCATTGGTAAGGATGAGATTTGGTCCATGTTCAATGATGCAGCTGATAAAAGCAAATTGAATCCTCAACAGAATGATAAATTGAAGAAATTGCAAAACGAAATTGTGAAACAGTGTGATGGCTTCCCTCTAGGTGTGAAGACATTAGCTGAGATCATTCCAGGCGCATTGGCTAAGGATCATTCCAGTGTCGATGCAGAACCAGAGAGGGGACACATTGACTCAGATCATTACAGTGCCACACAGAACCATAGAGGGGACACATTGACTGAGATCATTCCAATGGAGGTCCAGATTGATGGAGGGGGGTAA 1296 0.4452 MSEDFLEFLRNKFIDGLAEAEDQGRQLPTHRQFQRIRGVLLRKDITSSTPIQMIQMRNTLYRLLAVYTDCLIFSEKHPIPSTKFLLPFYNLFHFWFLKSTKEELVRIKRELGLYPCIEDSNGSPDHSEDQESQSHDPENQSQIWYPHVSEIRGFDRQFSKIRNWLLQSDEGFKDIAIVGIGGSGKTALARQLFYDEHIQGAFFPTLWISLSGKIDADIDLNQVVEDMLVELTTEHGHEKLRSCSTEEPLSSLGRRLLGKKYLIVLDGIWDETRDWYFSLGQALNWPDRDCNIQFGRDQKRNGNAVIITTRLEEVAKGMVGDKYLHSMEGIGKDEIWSMFNDAADKSKLNPQQNDKLKKLQNEIVKQCDGFPLGVKTLAEIIPGALAKDHSSVDAEPERGHIDSDHYSATQNHRGDTLTEIIPMEVQIDGGG* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0975 431 Gene3D - 144 329 IPR027417 -
Vvi19g0975 431 MobiDBLite consensus disorder prediction 120 140 - -
Vvi19g0975 431 PANTHER DISEASE RESISTANCE PROTEIN RP 97 380 IPR044974 GO:0006952
Vvi19g0975 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 381 IPR027417 -
Vvi19g0975 431 MobiDBLite consensus disorder prediction 388 410 - -
Vvi19g0975 431 Gene3D - 330 393 IPR042197 -
Vvi19g0975 431 Pfam NB-ARC domain 158 380 IPR002182 GO:0043531
Vvi19g0975 431 MobiDBLite consensus disorder prediction 390 409 - -
Vvi19g0975 431 PRINTS Disease resistance protein signature 255 269 - -
Vvi19g0975 431 PRINTS Disease resistance protein signature 174 189 - -
Vvi19g0975 431 PRINTS Disease resistance protein signature 367 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0975 Vvi-Chr19 12475648 12476943 Dispersed/Transposed