Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0974 ATGGACATGGCTTCCTCTTCATTACCACTCTCGGTAATCGATGACAGCCCAAACAATCCTAACTGTAGCAGCATCAATATGGCGCAGGATACTGATGAATATGTTTCCGAAATCGATCGCTTGGAACTGTACAAAGCTGTGCTCAATGGTGACTGGGAAAGGGCTTCACAATTATTGGTGCATAATCCACAATTACTCTCCGCCCGGTTCGGAACAGATGATTCCGGAATTCTTCACATAGCAGTTGAGTTAGGAGAGGCCAGAATGGGTTTCGTGGAGAAGTTGGTTGAGTTTATGTTACGTGAGGATCCAAGTGAGACACTGGCTCTGCGGGATTCTGATGACGCCACTGCCCTTTTCAACGCTGCAAGGGCTGGCAATATAAAAGCAGTCAAGTTCTTAGTGAAGAAAAACCAAAACTTGCCCAATATCTGCAACCGCCAACATTTTGCGCCTCTTCACACCGCTGTTAAGTATGGTCATAAAGAGCTGACTTTATATTTATTAAGCGTCACCAGAGATGATGTATGGTCAGGTTCGTCTGGAATCGAACTTCTGGGCAGAGCACTAATGGTGGGGTTTCATGATGTAGCACTGCGTCTGGTTGAACGTTATTCTGACCTTGCCACATGCCATTTCGATTCCGCCCCCCACGAGGATTTTGCCCCTTTGACAGTATTGGCTAAAAGGCCTTGGGCTTTCCGAAGTGGAAGTTGCTTCAACTTATGCCAACTCATGATATATCACTGTAGATTGGAAGCATCCATTTTGATAAATTTTTCTTCATTGTTTCCTAAAATTTTTTGGATGCCCTCCCCTCTAGTCAAGAAAATTTTTTCATTAGAAGAGATCGATATTGAGAAGCCCTCTGATGATACCTTGAAGATCAACATTTTTGGGTTGCAAAGAGAAGGGAATTGA 921 0.4397 MDMASSSLPLSVIDDSPNNPNCSSINMAQDTDEYVSEIDRLELYKAVLNGDWERASQLLVHNPQLLSARFGTDDSGILHIAVELGEARMGFVEKLVEFMLREDPSETLALRDSDDATALFNAARAGNIKAVKFLVKKNQNLPNICNRQHFAPLHTAVKYGHKELTLYLLSVTRDDVWSGSSGIELLGRALMVGFHDVALRLVERYSDLATCHFDSAPHEDFAPLTVLAKRPWAFRSGSCFNLCQLMIYHCRLEASILINFSSLFPKIFWMPSPLVKKIFSLEEIDIEKPSDDTLKINIFGLQREGN* 307
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0974 306 SMART ANK_2a 148 177 IPR002110 GO:0005515
Vvi19g0974 306 SMART ANK_2a 114 143 IPR002110 GO:0005515
Vvi19g0974 306 SUPERFAMILY Ankyrin repeat 43 211 IPR036770 -
Vvi19g0974 306 Gene3D - 30 228 IPR036770 -
Vvi19g0974 306 MobiDBLite consensus disorder prediction 1 20 - -
Vvi19g0974 306 Pfam Ankyrin repeats (3 copies) 78 169 IPR002110 GO:0005515
Vvi19g0974 306 PANTHER - 29 175 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0974 Vvi-Chr19 12444670 12447593 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0974 40 168 Miscellaneous Gene Families AT5G60070 31.579 3.59e-06 46.6