Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0971 ATGGTAAACATTATGGAGCCTGAGCTAATAAGGGATGTTTTGTTAAAGTCCAATGTCTTTCAAAAGCCACCCCCACACCCACTTGGCAAGTTGCTGGTTTCTGGTCTGGTGACCTTGGAAGGCGAACGATGGGCTAAACGTAGAAAGATCATCAACCCAGCTTTCCATCTAGAAAAGTTGAAGAATATGTTGCCGGCATTTCATTTGAGTTGTAGCGACATGGTGACCAAATGGAAAATGCTTTCAGTGGGGGGATCATGTGAGTTGGATGTTTGGCCCTATCTTGAAAATTTGACAGGGGATGTGATTTCTCGGACAGCATTTGGTAGTAGCTATGAAGAAGGAAGAAGGATATTCCAGCTCCAGAAAGAACAAACACATCTTGCAATCCAGGTTACAATGTCAGTTTATATCCCGGGATGGAGGTTTTTACCCACAAAGACGAACAGGAGGATGAAGCAAATAAGCAAAGAAGTATATGCATTGTTGAGGGGTATCATTAACAAAAGGGAGAAGGCAATGAAGGCTGGCGAAACTGCTAATAGTGACTTATTAGGTATACTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACAAGAAGATTAGAATGAGTGTCAAAGATGTCATTGAAGAGTGTAAGCTATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTGCTTGTATGGACAATGGTCCTGCTAAGCGAGCATCCAAACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAACCAGAAGCTGCTGGATTAAATCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATACCCACCAGTAGCAATGCTTGCTAGAGCTGTTTATAAGGATACTCAAGTGGGAGACATGTGTTTTCCAGCTGGAGTGCAGGTCGTGTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGGGATGATGCAAAGGAGTTTAATCCAGAGAGGTTTGCAGAAGGAGTTTTGAAGGCAACAAAAAACCAAGTTTCATTTTTCCCATTTGGTTGGGGTCCTCGGGTATGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTACAACACTTCTCATTTGAACTTTCGCCATCCTATGCTCATGCTCCTTTTAGTATCCTAACTATGCAACCCCAATATGGTGCACACCTGATTCTACGTGGACTTCAGTGTTGA 1245 0.4161 MVNIMEPELIRDVLLKSNVFQKPPPHPLGKLLVSGLVTLEGERWAKRRKIINPAFHLEKLKNMLPAFHLSCSDMVTKWKMLSVGGSCELDVWPYLENLTGDVISRTAFGSSYEEGRRIFQLQKEQTHLAIQVTMSVYIPGWRFLPTKTNRRMKQISKEVYALLRGIINKREKAMKAGETANSDLLGILMESNFREIQEHQNNKKIRMSVKDVIEECKLFYLAGQETTSVLLVWTMVLLSEHPNWQARAREEVLQVFGNKKPEAAGLNHLKIVTMIFHEVLRLYPPVAMLARAVYKDTQVGDMCFPAGVQVVLPTILVHHDHEIWGDDAKEFNPERFAEGVLKATKNQVSFFPFGWGPRVCIGQNFAMMEAKIALAMILQHFSFELSPSYAHAPFSILTMQPQYGAHLILRGLQC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0971 414 SUPERFAMILY Cytochrome P450 1 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 Gene3D Cytochrome P450 1 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS E-class P450 group I signature 231 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS E-class P450 group I signature 98 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS E-class P450 group I signature 273 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS E-class P450 group I signature 211 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS E-class P450 group I signature 314 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS E-class P450 group I signature 350 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS E-class P450 group I signature 360 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 405 - -
Vvi19g0971 414 CDD CYP72 1 408 - -
Vvi19g0971 414 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 353 362 IPR017972 GO:0005506|GO:0016705
Vvi19g0971 414 Pfam Cytochrome P450 1 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS P450 superfamily signature 222 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS P450 superfamily signature 274 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS P450 superfamily signature 351 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0971 414 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0971 Vvi-Chr19 12274776 12279258 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0971 2 412 Cytochrome P450 AT3G14690 59.564 0.0 539