Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0948 ATGCATTCTCAGACTCTTCAATTGCTTAACCACCTATGTACTAAAGTTGAAGATTTGGAAGTACCAAGAGCAAAGGAAATATTCAGCCAATCATTCATTAATGGGGCAAAATATGGAATTCCCGAAATTCTGGAAAACATTCTAAAGTTATATCCTTCTGCACTTCAGTATCTGGATGAGGAAGTATTCAAATTGGCAATATTAAATCGTTATGAAAAGATTTTCAACCTCATCTGCGAAATCGGTATGCATAGACAATTTATAATACGAATCAGAGGTGATTCAAATAACAATATCTTGCATTTGGCTGGAAAATTGGCCCCTCCACACCGGCTCAGTCTCGTTTCTGGTGCAGCTCTACAAATGCAACGTGAGTTACATTGGTTTCAGGAAATCGAAAAATATGCACCGGAAGCCTTCAGGGAATTTGAGAACGATGAACAAGAGACACCAAAAATGGTATTTATAAAGGAACATAAAGAGTTGATAAAAGAAGGAGAGAAATGGATGAAAGGCACAGCAAAATCTTACACATTGGCAGCAGCGCTTATTGCTACTGTAGTGTTTGCAGCAGCAATTTCCATCCCGGGTGGCAACCATGATGATACTGGCATACCAAATTTCTCCGAAGAATATACCTTCAAATTTTTTGCAGTTTCGGATGCTCTTTCCCTCTTCCTATCCATTGCTTCGGTGCTGATATTCCTATCCATTCTCACGGCACGATATGCTGAAGATGATTTTCTTTTTGTCCTTCCCAGGAGGTTGATATTTGGCCTTGTTACTCTATTCCTCTCCGTAACATTCATGATGATAGCCTACAGTAGCGCAATCTATCTTCACTTTGGTGAAAAGAAGGCTTGGATTCTTATTACCTTGGCTGCATTAACCTGTTTGCCAGTGACCTTGGCTATAGACTTATCAATTTTAAACTGA 936 0.3921 MHSQTLQLLNHLCTKVEDLEVPRAKEIFSQSFINGAKYGIPEILENILKLYPSALQYLDEEVFKLAILNRYEKIFNLICEIGMHRQFIIRIRGDSNNNILHLAGKLAPPHRLSLVSGAALQMQRELHWFQEIEKYAPEAFREFENDEQETPKMVFIKEHKELIKEGEKWMKGTAKSYTLAAALIATVVFAAAISIPGGNHDDTGIPNFSEEYTFKFFAVSDALSLFLSIASVLIFLSILTARYAEDDFLFVLPRRLIFGLVTLFLSVTFMMIAYSSAIYLHFGEKKAWILITLAALTCLPVTLAIDLSILN* 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0948 311 PANTHER CASKIN 5 302 - -
Vvi19g0948 311 Pfam Domain of unknown function 167 280 IPR026961 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi19g0948 Vvi-Chr19 11785753 11793341 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0948 30 296 Miscellaneous Gene Families AT5G54710 24.528 9.63e-11 60.8