Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0942 ATGAAGCATAGCTCAGTTGCAATTTCTTTTGGGTTCCTTACTGTGCTCATAAGCTGTTTATGGAGGCTACTGAATTGGGTGTGGTTGAGGCCAAAGAGGTTAGAAAGATGCCTTAGAGAGCAAGGCCTGGCTGGGAATTCTTATAGGCTTTTACATGGGGACTTCAAAGAGATGTCCATGATGTTAAAAGAAGCATATTCAAGACCAATCAGCCTCTCCGATGATACTACTCCACGTGTCCTGCCCTTCCATTTTCATTTCATTAAGAAATACGGTAAAAATTCCTTTGCATGGTTCGGTCCAAATCCAATGGTAAACATTATGGAGCCTGAGCTAATAAGGGATGTTTTGCTAAAGTCCAATGTCTTTCAAAAGCCACCCCCACACCCACTTGGCAAGTTGCTGGTTTCTGGTCTGGTGACCTTGGAAGGCGAACGATGGGCTAAACGTAGAAAGATCATCAACCCAGCTTTCCATCTAGAAAAGTTGAAGAATATGTTGCCGGCATTTCATTTGAGTTGTAGCGACATGGTGACCAAATGGAAAATGCTTTCGGTGGGGGGATCATGTGAGTTGGATGTTTGGCCCTATCTTGAAAATTTGACAGGGGATGTGATTTCTCGGACAGCATTTGGTAGTAGCTATGAAGAAGGAAGAAGGATATTCTAG 669 0.4335 MKHSSVAISFGFLTVLISCLWRLLNWVWLRPKRLERCLREQGLAGNSYRLLHGDFKEMSMMLKEAYSRPISLSDDTTPRVLPFHFHFIKKYGKNSFAWFGPNPMVNIMEPELIRDVLLKSNVFQKPPPHPLGKLLVSGLVTLEGERWAKRRKIINPAFHLEKLKNMLPAFHLSCSDMVTKWKMLSVGGSCELDVWPYLENLTGDVISRTAFGSSYEEGRRIF* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0942 222 SUPERFAMILY Cytochrome P450 78 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0942 222 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 222 - -
Vvi19g0942 222 Pfam Cytochrome P450 84 216 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0942 222 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Vvi19g0942 222 Gene3D Cytochrome P450 31 220 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0942 222 PRINTS Group II E-class P450 signature 144 164 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0942 222 PRINTS Group II E-class P450 signature 200 218 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0942 Vvi-Chr19 11550491 11553113 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0942 4 222 Cytochrome P450 AT3G14690 53.394 1.07e-79 246