Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0940 ATGGAGCCTGAGCTAATGAGGGATGTTTTGTTGAAGTCCAATATCTTTCAAAAGACACCCTCACACCCGTTGGTCAAGTTGCTGGTTTCTGGTCTAGTGGTTTTGGAAGGTGAACAATGGGCCAAACGTAGAAAGATGATCAACCCAGTTTTCCATCCAGAAAAGTTGAAGAATATGTTACCGGCATTTCATTTGAGTTGTAGCGACATGTTGAACAAATGGAAGAAGCTTTCGGTGAAGGGATCATGTGAGTTGGATGTTTGGCCCTATCTTGAAAATTTGACAGGGGATGTGATTTCTCGGACAGCATTTGGCAGTAGCTACGAAGAAGGAAGAAGGATATTCCAACTCCAGAAAGAACAGACATATCTTGCAATCAAGGTTGCAATGTCAGTTTATATCCCAGGATGGAGGTTTTTTCCCACAAAGACGAACAAGAGGATGAAGCAAATAAGCAAAGAAGTACATGCATTGTTGGGGGGCATCATCAACAAAAGGGAGAAGGCAATGGAGGCTGGCGAAACTGCTAATAGTGACTTATTAGGTATATTAATGGAATCCAATTTTAGAGAAATTCAAGAACATCAAAATAACACGAAGATTGGAATGAGTGCCAAAGATGTCATTGATGAATGTAAGCTATTCTATCTTGCTGGCCAAGAGACAACCTCAGTTTTGCTTTTATGGACAATGGTCCTGCTAAGCCAACATACAGACTGGCAAGCTCGTGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAACAAACCTGAAAATGATGGCTTAAACCACCTAAAAATTGTTACCATGATTTTTCATGAGGTTCTTAGGTTATATCCACCAGTAACAGTGCTTACCAGAATGGTTTCTAAGGACACTCAAGTGGGAGACATGTATTTTCCAGCCGGAGTGCAGGTCTCTTTGCCCACCATCCTAGTTCACCATGATCATGAAATTTGGGGAGACGATGCAAAGGAGTTTAATCCAGAGAGGTTTGCTGAAGGAGTTTCAAAGGCAACAAAAAACCAAGTTTCATTTTTACCATTCGGTTGGGGTCCTCGGGTGTGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAACAGCTTTGGCAATGATCTTACAACGCTTCTCATTTGAACTTTCGCCATCCTATGCTCATGCTCCTTTCAGTCTTATAACTATCCAACCCCAATATGGTGCACACCTGATTCTACGTGGACTTTAA 1227 0.4148 MEPELMRDVLLKSNIFQKTPSHPLVKLLVSGLVVLEGEQWAKRRKMINPVFHPEKLKNMLPAFHLSCSDMLNKWKKLSVKGSCELDVWPYLENLTGDVISRTAFGSSYEEGRRIFQLQKEQTYLAIKVAMSVYIPGWRFFPTKTNKRMKQISKEVHALLGGIINKREKAMEAGETANSDLLGILMESNFREIQEHQNNTKIGMSAKDVIDECKLFYLAGQETTSVLLLWTMVLLSQHTDWQARAREEVLQVFGNNKPENDGLNHLKIVTMIFHEVLRLYPPVTVLTRMVSKDTQVGDMYFPAGVQVSLPTILVHHDHEIWGDDAKEFNPERFAEGVSKATKNQVSFLPFGWGPRVCIGQNFAMMEAKTALAMILQRFSFELSPSYAHAPFSLITIQPQYGAHLILRGL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0940 408 Gene3D Cytochrome P450 1 406 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 349 358 IPR017972 GO:0005506|GO:0016705
Vvi19g0940 408 PRINTS E-class P450 group I signature 207 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PRINTS E-class P450 group I signature 94 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PRINTS E-class P450 group I signature 346 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PRINTS E-class P450 group I signature 227 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PRINTS E-class P450 group I signature 356 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PRINTS E-class P450 group I signature 310 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 401 - -
Vvi19g0940 408 PRINTS P450 superfamily signature 218 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PRINTS P450 superfamily signature 347 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 PRINTS P450 superfamily signature 270 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 SUPERFAMILY Cytochrome P450 2 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0940 408 CDD CYP72 1 404 - -
Vvi19g0940 408 Pfam Cytochrome P450 2 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0940 Vvi-Chr19 11491857 11505034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0940 3 408 Cytochrome P450 AT3G14610 61.369 0.0 528