Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0936 ATGTCATTGAAGAGTGTAAGCTATTCTATCTATCTTGCTGGCCAAAAGACAACCTCAGTTTTGCTTGTATGGACAATGGCCCTGCTAAGCGAGCATCCAAACTGGCAAGCTCATGCAAGAGAAGAGGTTTTACAGGTTTTTGGGAATAAAAAATGGGAAGTTGATGGATTAAATCACCTAAAAATTGCCACCATGATTTTTCATAAGGTTCTTAGGTTATACCCACTAGTAGCAATGCTTCCTAGAGTTGTTTATAAGGACACTCAAGTGGGAGACATGTGTTTTCCAGCTGGAGTGCAGGTCTTGTTGTCCACCATCCTAGTTCACCATGATCATGAAATTTTGGGGGATGATGCAAAGGAGTTTAATCCAGAGAGGTTTGCAGAAGGAGTTTTGAAGGCAACAAAAAACCAAGTTTCATTTTTCCCATTTGGTTGGGGTCCTCGGGTATGCATTGGACAAAATTTTGCAATGATGGAGGCAAAAATAGCTTTGGCAATGATCTTATAA 510 0.4039 MSLKSVSYSIYLAGQKTTSVLLVWTMALLSEHPNWQAHAREEVLQVFGNKKWEVDGLNHLKIATMIFHKVLRLYPLVAMLPRVVYKDTQVGDMCFPAGVQVLLSTILVHHDHEILGDDAKEFNPERFAEGVLKATKNQVSFFPFGWGPRVCIGQNFAMMEAKIALAMIL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0936 169 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 169 - -
Vvi19g0936 169 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 144 153 IPR017972 GO:0005506|GO:0016705
Vvi19g0936 169 PRINTS E-class P450 group I signature 151 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 PRINTS E-class P450 group I signature 22 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 PRINTS E-class P450 group I signature 105 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 PRINTS E-class P450 group I signature 141 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 PRINTS E-class P450 group I signature 2 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 PRINTS P450 superfamily signature 151 162 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 PRINTS P450 superfamily signature 65 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 PRINTS P450 superfamily signature 13 30 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 PRINTS P450 superfamily signature 142 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 SUPERFAMILY Cytochrome P450 4 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 Pfam Cytochrome P450 8 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0936 169 Gene3D Cytochrome P450 2 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0936 Vvi-Chr19 11363527 11365039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0936 11 169 Cytochrome P450 AT3G14610 66.250 2.93e-73 226