Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0933 ATGTCTTCTCTGCTCGCTTCAGTTGATCTTCCTCCAAAGAAAGATACCACGACCGAGGTTGTCCGTGACTCTGCAAATTATCATCCTAGCATCTGGGGGAATCATTTCCTTGAAAATGCTTCTCATGACGTGAAGGTACACATCATTGATGGTCATACGGAGCAACAAGTTCAACAACTGAAAGAAGAAGTGCGGAAGATGATAATAAGTTCTACTGATAACTATTCACAAAAATACAACTTGATTGATACAATACAACGCTTAGGGGTGTCTTACCACTTTGAAAGTGAGATTGAAGAAGCTTTAAAACACTTGTCTGATTATTATCATGTCTCTTGTGAAGAAGATGATGACGATCTTTGTACTGTTGCTCTCCGATTTCGATTACTTAGACAACATGGGTATAATATTTCATATGATGCTTTCAAAAAGTTCAAGGACAACAAGGGGAACTTCAAGGAATCCCTCATTAGCGATGTGAAAGGCATGTTGAGCTTGTATGAAGCCACGCATCTGAGAAAGCATGGAGAAGATATACTGGATGAAGCACTTACTTTCACTACCACTCATCTTCAGTCCATGCCATATTTCTCCAGTCCTCTGGCTGAGCAAGTAGTTCACGCCTTAAGGCAGCCTCTCCATAAGGGCATTCAGAGGTTAGAGGCCAGGCATCACATTTCTATCTACCAAGAAGATGATGCACACAGTGAGGCTTTATTGAAACTTGCGAAGTTGGATTTCAACCAATTACAGAAAGTACACCAGCAGGAGCTGAGTGTTATTGTTAGTTGGTGGAAAGATTTAGACTTTGCGAAAAAACTGCCTTTTGCAAGAGACAGAGTGGTTGAGTGCTACTTTTGGGCACTGACGGTGTACTTTGAGCCCCAGTATTTCCATGCTAGAAGGATACTAACCAAAGTAATTGCCTTGACTTCTATTCTTGACGACATCTATGATTTGTTTGGTACACTTGAAGAACTCGAGATCTTCACTGAAGCAATCGAAAGGTGGGATATTAGTTTCATAGGTCAACTTCCAGATTACATGAAAGTGTTTTATCAAGCACTATTAGATGTTTACAATGAAATTGAGGAAGTGACGGTCAAGGCAGGAAGATCGTACCGTGCCCATTATGCAAAAGAAGCAATGAAAAATCAAGTTAGAGCATACTTCGCTGAAGCAAAATGGCTCTTCCTACGACAAATGCCAACAATAGAGGAGTATATGTCTGTCGCCTTACCTACCTCTGGATACCAGTTGCTAGCAACCACGTCCTTTATTGGAATGGAAAACATGGTGACAAAGGACACATTTGAATGGGTTTTCAGTGATCCTAAGATTGTTAGGGCTTCATCCACAATTTGCAGGCTTATGAATGATATGGTACCCCACAAGTTTGAACAAAAGAGAGGACATGTTCCCTCAGCGGTTGAATGTTACATGAAGCAACATGGTGTATCAGAGCAGCAAACACTCGATGAACTTCACAACCAAGTCAGGGACGCCTGGAAGGATATGAATCAAGAGTGCCTCAGCCCAACAGCAGTTCCAATGCCCATCATCATGCGAGTTTTAAATCTTGCACGTTTTATTGATGTTGTGTACAAAGATGAAGATGGCTATACTCATTCTGAGACTGTGCTAAAAGATCTTATAGCTTCACTGCTAATCCACCCAGTTCCGATATGA 1689 0.4127 MSSLLASVDLPPKKDTTTEVVRDSANYHPSIWGNHFLENASHDVKVHIIDGHTEQQVQQLKEEVRKMIISSTDNYSQKYNLIDTIQRLGVSYHFESEIEEALKHLSDYYHVSCEEDDDDLCTVALRFRLLRQHGYNISYDAFKKFKDNKGNFKESLISDVKGMLSLYEATHLRKHGEDILDEALTFTTTHLQSMPYFSSPLAEQVVHALRQPLHKGIQRLEARHHISIYQEDDAHSEALLKLAKLDFNQLQKVHQQELSVIVSWWKDLDFAKKLPFARDRVVECYFWALTVYFEPQYFHARRILTKVIALTSILDDIYDLFGTLEELEIFTEAIERWDISFIGQLPDYMKVFYQALLDVYNEIEEVTVKAGRSYRAHYAKEAMKNQVRAYFAEAKWLFLRQMPTIEEYMSVALPTSGYQLLATTSFIGMENMVTKDTFEWVFSDPKIVRASSTICRLMNDMVPHKFEQKRGHVPSAVECYMKQHGVSEQQTLDELHNQVRDAWKDMNQECLSPTAVPMPIIMRVLNLARFIDVVYKDEDGYTHSETVLKDLIASLLIHPVPI* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0933 562 Gene3D - 73 235 IPR036965 GO:0010333|GO:0016829
Vvi19g0933 562 SUPERFAMILY Terpenoid synthases 235 560 IPR008949 -
Vvi19g0933 562 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 234 IPR008930 -
Vvi19g0933 562 FunFam Isoprene synthase, chloroplastic 204 550 - -
Vvi19g0933 562 Pfam Terpene synthase, N-terminal domain 31 209 IPR001906 GO:0010333|GO:0016829
Vvi19g0933 562 CDD Terpene_cyclase_plant_C1 22 559 IPR044814 GO:0010333|GO:0016102
Vvi19g0933 562 SFLD Terpene Cyclase Like 1 C Terminal Domain 237 561 IPR034741 -
Vvi19g0933 562 PANTHER OS04G0344100 PROTEIN-RELATED 20 560 - -
Vvi19g0933 562 FunFam Isoprene synthase, chloroplastic 73 235 - -
Vvi19g0933 562 Gene3D Farnesyl Diphosphate Synthase 29 550 IPR008949 -
Vvi19g0933 562 SFLD Isoprenoid Synthase Type I 237 561 - -
Vvi19g0933 562 Pfam Terpene synthase family, metal binding domain 240 505 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0933 Vvi-Chr19 11276155 11278623 Dispersed/Tandem