Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0932 ATGGAGATAGCATATGATTCAGTTTTAATCTTCTGTGCCTTTGCTCTTTTATCATTGGCATGGAGAGCATTTTATTTGGTGTGGCTGAGGCCGAGGAGGCTTGAGAGGTGCCTTAGACGGCAAGGCCTTATGGGAAACTCTTACAGACCATTGCACGGAGACGCAAAGAAGGTTTCAATAATGTTAAAAGAGGCCAACTCAAGACCCATAAATCTCTCAGATGATATAGTGCCGCGCGTCATTCCTTTTCTCTATAAAACCATCCAGCAGTATGGTAAAAATTCCTTCACGTGGGTTGGTCCAATTCCGAGAGTGAATATCATGAAGCCTGAACTGATAAGGGAGGTCTTCCTCGAGGCTGGTCGCTTTCAAAAGCAAAAACCAAATCCGCTAGCCAATTTTCTTCTAACAGGACTTGTAAGCTATGAGGGTGAGAAATGGGCTAAGCACAGAAAGCTTCTGAATCCAGCATTCCATGTAGAGAAATTGAAGCTTATGTCACCTGCATTTCATTTGAGTTGTCGCCAAATGATAAGCAAAATGGAGGAGATGGTATCCCCAGAGGGGTCCTGTGAATTGGATGTTTGGCCCTTTCTAAAAAATTTGACAGCTGATGCCCTCTCTCGAACCGCATTTGGTTCTAGCTATGAAGAAGGAAGAAGGTTATTCCAACTCCTACAAGAACAAACATATCTAACCATGGAGGTCTTTCAATCAGTATACATTCCTGGATGGTGGTATTTGCCAACGAAAAGGAACAAGAGGATGAAGAAAATTGACAAAGAGATGAACACATTGTTGAATGATATCATTACCAAAAGAGATAAAGCAATGAAGGATGGCAAAACGGCTAATGAGGACTTATTGGGTATATTAATGGAATCCAATTCTAAAGAAATTCAAGAGGGAGGAAACAGTAAGAATGCTGGAATAAGTATGCAAGAAGTCATTGAGGAGTGTAAGCTATTCTACTTAGCTGGCCAAGAGACTACCTCAAATTTACTTCTCTGGACAATGGTTTTGTTAAGCAAGCATCCAAACTGGCAAACACTGGCAAGGGAAGAAGTTTTTCAAGTTTTTGGGAAAAATAAGCCAGAATTTGCTGGCTTAAGTCGCCTAAAAGTTGTTACAATGATTTTCTATGAGGTCCTTAGGCTATATCCACCAGGTGCCACACTTAATCGAGCTGTTTATGAGGACATCAATCTGGGGGAACTTTATTTACCATCTGGAGTGGAGATTGTACTGCCCACCATCCTAGTGCATCATGATCCTGAAATTTGGGGAGATGATGTGAAGGAGTTCAAACCAGAGAGGTTCTCTGAAGGTGTTATGAAGGCAACAAAAGGGCAAGTCTCCTACTTTCCATTCGGCTGGGGTCCTCGCATATGCATCGGACAAAACTTTGCAATGGCAGAAGCAAAAATGGCGCTGGCAATGATACTACAATGCTTCACATTTGAGCTTTCACCATCATATACTCATGCTCCTACTTCTGTTTTAACTTTGCAACCCCAATATGGTGCGCACTTGATTTTACATAAAATCTAG 1551 0.4172 MEIAYDSVLIFCAFALLSLAWRAFYLVWLRPRRLERCLRRQGLMGNSYRPLHGDAKKVSIMLKEANSRPINLSDDIVPRVIPFLYKTIQQYGKNSFTWVGPIPRVNIMKPELIREVFLEAGRFQKQKPNPLANFLLTGLVSYEGEKWAKHRKLLNPAFHVEKLKLMSPAFHLSCRQMISKMEEMVSPEGSCELDVWPFLKNLTADALSRTAFGSSYEEGRRLFQLLQEQTYLTMEVFQSVYIPGWWYLPTKRNKRMKKIDKEMNTLLNDIITKRDKAMKDGKTANEDLLGILMESNSKEIQEGGNSKNAGISMQEVIEECKLFYLAGQETTSNLLLWTMVLLSKHPNWQTLAREEVFQVFGKNKPEFAGLSRLKVVTMIFYEVLRLYPPGATLNRAVYEDINLGELYLPSGVEIVLPTILVHHDPEIWGDDVKEFKPERFSEGVMKATKGQVSYFPFGWGPRICIGQNFAMAEAKMALAMILQCFTFELSPSYTHAPTSVLTLQPQYGAHLILHKI* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0932 516 FunFam Cytochrome P450 734A1 28 516 - -
Vvi19g0932 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 509 - -
Vvi19g0932 516 Gene3D Cytochrome P450 73 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 Pfam Cytochrome P450 87 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi19g0932 516 CDD CYP72 81 512 - -
Vvi19g0932 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Vvi19g0932 516 SUPERFAMILY Cytochrome P450 78 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0932 Vvi-Chr19 11236194 11240749 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0932 1 516 Cytochrome P450 AT3G14690 55.019 0.0 605