Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0633 ATGAGGTTGAGAAGAAACACAGATGATGAACAATTGAGGCTGTCGGATCCGGAACATCACACTGTTTCTCGACCCTTGGATAGGGAATGTGAGCAGAATCCAATGAGATTGATGGGGATCTTGGTCGTTTGCTTGATGGTTGTTTCAGTTCTGTTTTCAGTGTCTGTGGTCCTTAGAGACCCACCATCTGATGGAGTTTGGGCTAGTGAAGAAACTAAGTTTCTTCAAGTAAATCCTAGGAAAGATGCAGAAGATAATCTCTCATGGTCAGCCGAGGAACCTAAAGATAAACTGCTTGGCGGCCTTCTTGATGCTGGATTCAATGAAAGATCTTGTCTCAGCAGGTACCAATCAGCCTTATATCGCAAAGAACTACTGCATAAACCTTCTTCTTACCTCCTCTCTAAGTTACGGAGTTATGAAGCTCTTCATAAACGATGTGGACCCTATACAGAATCCTACAACCGTACCTTGAAACAACTCCAGTTGGGCCAACATATGGAGCAATCAGATTGCAACTATTTGGTATGGATATCATTCAGTGGCTTAGGCAACAGGATACTAACTCTAGCTTCGGCATTTCTTTATGCTATCCTCACAAACAGGGTCCTACTTGTTGATCCTGGAGCTGACATGCCTGATCTCTTCTGTGAACCTTTTCCCGAGGTTTCCTGGTTACTCCCCTTGGACTTTCCCCTTAAAAATGAGTTTAACAGCTTTGATCAGAAATCCCCATTTTGTTATGGGAAAATGCTCAAGAATAAGACTTTGACAGATTCTAGTTGGTCGATCCTGCCACCTTATGTGTATCTCCATCTAGTCCATGATTATGATGATCACGATAAGATGTTCTTCTGCAATCAAGATCAATCTTTTCTCCGAAAAATCCCTTGTTTAATTATCAAAACTGATAACTACTTTGTTCCATCTCTCTTCTTGATCCCTTCATTTGAGCAAGAACTCAGTAACCTGTTCCCAGTAAAGGGAACGGTTTTCCACTTCTTGGGCAGATACCTCTTCCACCCCACAAATGTTGTATGGGGGCTTATCACCAGGTACTATCAAGCTTATTTAGCTAAAGCAGATGAGACAATAGGCATCCAGATCAGAGTCTTTGACACTGGGATTGGTCCATTCCAACATGTATTAGATCAGATCATAGCTTGTACCATGACAGAGAATTTGCTGCCAGAAATCAACATGAGGGAACCTGTCGTTAGTTCATATGGACATAAGAAGTCTAAAGCTGTACTCATGACATCTTTGAGCGCTGGATACTTTGAGAAAGTAAGGAACATGTATTGGGAACACCCAACTGTGACAGGGGAAGTGATAGGCGTTTATCAACCAAGTCATGAAGAATATCAACAAACTGAGAAGCAGAATCACAACAGGAAGGCATGGGCAGAAATGTATCTACTGAGCTTGACTGATGTGTTGGTCACTAGTTCATGGTCAACTTTTGGGTATGTGGCTCAGGGCCTTGGAGGATTAAAACCTTGGATTCTCTACAAGCCTGAAAATCAGACTGCCCCAGATCCACCTTGTCGCCGAGCCATGTCAATGGAGCCTTGTTTCCACGCCCCTCCCTTCTATGACTGCAAGGCAAAGAAGGGGGTTGACACAGGCGCACTTGTTCCTCACGTGAGGCATTGTGAGGACATGAGCTGGGGTCTCAAACTGGTTGATGACAGCCAGGAACATGGGGTTGTGAGGACATGA 1722 0.4373 MRLRRNTDDEQLRLSDPEHHTVSRPLDRECEQNPMRLMGILVVCLMVVSVLFSVSVVLRDPPSDGVWASEETKFLQVNPRKDAEDNLSWSAEEPKDKLLGGLLDAGFNERSCLSRYQSALYRKELLHKPSSYLLSKLRSYEALHKRCGPYTESYNRTLKQLQLGQHMEQSDCNYLVWISFSGLGNRILTLASAFLYAILTNRVLLVDPGADMPDLFCEPFPEVSWLLPLDFPLKNEFNSFDQKSPFCYGKMLKNKTLTDSSWSILPPYVYLHLVHDYDDHDKMFFCNQDQSFLRKIPCLIIKTDNYFVPSLFLIPSFEQELSNLFPVKGTVFHFLGRYLFHPTNVVWGLITRYYQAYLAKADETIGIQIRVFDTGIGPFQHVLDQIIACTMTENLLPEINMREPVVSSYGHKKSKAVLMTSLSAGYFEKVRNMYWEHPTVTGEVIGVYQPSHEEYQQTEKQNHNRKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENQTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGALVPHVRHCEDMSWGLKLVDDSQEHGVVRT* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0633 573 FunFam Galactoside 2-alpha-L-fucosyltransferase 348 502 - -
Vvi17g0633 573 Gene3D - 169 222 - -
Vvi17g0633 573 PANTHER FUCOSYLTRANSFERASE 2-RELATED 38 564 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi17g0633 573 Pfam Xyloglucan fucosyltransferase 88 535 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi17g0633 573 FunFam Galactoside 2-alpha-L-fucosyltransferase 170 221 - -
Vvi17g0633 573 Gene3D - 349 518 - -
Vvi17g0633 573 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0633 Vvi-Chr17 7027585 7031380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0633 35 562 Xyloglucan Fucosyltransferase1 AT2G03220 63.842 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0633 K13681 - vvi:100262032 1146.34