Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1032 ATGGGAATTTTTGAAGAAATGGGTTTCTGTGGTAATCTTGATTTTCTATCGGCTCCACCAGGGGAAGGAGAGGTGGCTCCTGAAAATGAACCAGAGGCAACTGTGGAGGAGGATTATTCTGATGAGGAGATGGATGTTGATGAGCTTGAGAGGAGGATGTGGAGGGATCGCATGCTGCTGAGGCGGCTTAAAGAACAAAACAAGGGTAAGGAGGGAGTGGACAATGCTAAGCAGCGCCAGTCCCAGGAGCAAGCTCGAAGGAAGAAGATGTCCCGAGCACAGGATGGGATACTGAAATACATGCTGAAAATGATGGAAGTTTGTAAAGCTCAGGGTTTTGTCTATGGTATCATTCCCGAGAAGGGGAAACCAGTGAGCGGAGCATCTGACAATCTCCGGGCATGGTGGAAGGAGAAGGTGAGGTTTGATCGGAATGGCCCTGCTGCGATTGCGAAATACCAGGCTGATCATTCAATTCCTGGAAAGAATGAGGACTGCAATACAATGGCATCCACCCCCCATACCCTGCAGGAGCTACAAGACACCACACTTGGATCACTTTTGTCAGCTTTGATGCAGCACTGCGACCCACCTCAGAGGCGGTTCCCATTGGAGAAGGGTATTGCACCACCTTGGTGGCCTACTGGGAATGAAGAATGGTGGCCTCAATTGGGATTGCCCAAAGATCAGGGTCCTCCCCCATACAAGAAGCCTCATGATCTAAAGAAGGCTTGGAAGGTCAGTGTTCTCACTGCAGTGATCAAGCACATGTCCCCTGACATTGCTAAGATCCGCAAGCTTGTTCGTCAGTCTAAATGCTTGCAGGATAAGATGACTGCCAAAGAGAGTGCCACTTGGCTGGCCATTATCAACCAGGAAGAGGCGTTGTCCCGAAAACTGTATCCTGACAGCTGCCCACCTGTGCCTTTGGCTGGTGGGAGTGGATCTTTTGTCATCAGTGACACCAGTGATTATGATGTTGAGGGTGTGGAAGATGAGGCCAACATTGAAGTGGAGGAGTGCAAGCCCCGTGATGTCAATCTCTTCAATTTAGGCGTAGGAGCCAGAGATAGGCTTATGGTGCCACCACTGGCTCCTTCGATCAAGGGAGAGCTTGTAGAGACCAACTCAGATTTCATCCAGAAGAGGAAGCAGCCACCTGATGAGCCGCATATAATGATGGATCAGAAAATGTATACCTGTGAATACACTCAATGCCCCTACAACAATTACCGTCTTGCGTTTCTCGACAGGGCATCCAGAAACAATCATCAGATGAATTGTCTATACAGGAGTAATTCTTCACAAGGGTTTGGAATGTCGAATTTCCAAATTAACAATGAGAAACCAGCAGCCTTCTCTCTACCCTTTGCTCAACCCAAGGCAGCAGCTCCACCAGTGAACCAGTCTCCTGCTTTCAATGTTTCAGGACTTGGACTTCCAGAAGATGGGCAAAAAATGATTTCTGACCTAATGTCATTCTATGACACAAATCTCCAGCGAAACAAGAGCTTGAATCCTGGGAACCTTAATGTTATGGAAGATCAAAATCAGCCGCAGCAGCAGCAGCAGCAGCAGAAGTTTCAACTTCAGCTAGATGATAACTTCTTCAATCAGGGGGTTATGATGGGTGGCAACATCACTGAAGAAACAAACATGCCCTTAAATCATTCTGTTTTCTCGTCAAGTGAGATCCAGTTTGATCAGTGTAAAGCATTTGATTCTCCATTTGACACCAACCCAAATGACAACATTGCTGACTTTAGATTTGGGTCTCCATTCAACTTGGCAGCAGTAGATTATACGGTGGACCCACTGCCAAAGCAGGATGTATCCATGTGGTACCTTTGA 1851 0.4738 MGIFEEMGFCGNLDFLSAPPGEGEVAPENEPEATVEEDYSDEEMDVDELERRMWRDRMLLRRLKEQNKGKEGVDNAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHSIPGKNEDCNTMASTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIAPPWWPTGNEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCPPVPLAGGSGSFVISDTSDYDVEGVEDEANIEVEECKPRDVNLFNLGVGARDRLMVPPLAPSIKGELVETNSDFIQKRKQPPDEPHIMMDQKMYTCEYTQCPYNNYRLAFLDRASRNNHQMNCLYRSNSSQGFGMSNFQINNEKPAAFSLPFAQPKAAAPPVNQSPAFNVSGLGLPEDGQKMISDLMSFYDTNLQRNKSLNPGNLNVMEDQNQPQQQQQQQKFQLQLDDNFFNQGVMMGGNITEETNMPLNHSVFSSSEIQFDQCKAFDSPFDTNPNDNIADFRFGSPFNLAAVDYTVDPLPKQDVSMWYL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1032 616 FunFam Ethylene insensitive 3-like 1 79 157 - -
Vvi13g1032 616 FunFam Ethylene insensitive 3-like 1 167 304 - -
Vvi13g1032 616 SUPERFAMILY DNA-binding domain of EIN3-like 173 297 IPR023278 GO:0003700|GO:0005634
Vvi13g1032 616 MobiDBLite consensus disorder prediction 29 45 - -
Vvi13g1032 616 Coils Coil 32 66 - -
Vvi13g1032 616 Gene3D - 79 160 IPR023278 GO:0003700|GO:0005634
Vvi13g1032 616 MobiDBLite consensus disorder prediction 18 47 - -
Vvi13g1032 616 MobiDBLite consensus disorder prediction 65 90 - -
Vvi13g1032 616 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 29 562 IPR006957 GO:0003700|GO:0005634
Vvi13g1032 616 Pfam Ethylene insensitive 3 47 294 IPR047091 GO:0003700
Vvi13g1032 616 Gene3D - 171 304 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1032 Vvi-Chr13 15947899 15949749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1032 3 615 EIL Transcription Factor Family AT3G20770 55.932 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vvi13g1032 EIN3 5.1e-132 No_clan