Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2595 ATGGACTCCTCGTCGTTTTCGAGCCTCCGCGCCTACCTCCGCGCCCTCTCTCACACCCCCACGCGCCTTGCACGACGCGCCCTCTCCATCTCCACCTCCTACGACGAGATGAGCCACGTCCGCGCCCGCTCCGGCACCACCATGCGCAAGACCCTCCGCTGGTACGACCTCGTCTCCCTTGGCATCGGCGGAATGGTCGGCGCCGGTGTCTTCGTCACCACAGGCCGCGCTACCCGCCTCTACGCTGGCCCCGCCGTCCTCCTCTCCTACGCCATTGCCGGCCTCTGCGCCCTCCTCTCCGCCTTCTGCTACACCGAGTTTGCCGTCGACATGCCCGTCGCCGGCGGCGCCTTCAGCTATCTCCGCGTCACCTTCGGTGAATTCGCAGCTTTTATGACCGGCGCGAATCTCGTGGTGGACTACGTGCTTTCCAATGCCGCCGTCGCCCGAGGCTTCACCGCCTACCTCGGCGCCGCAATCGGAATCTCCTCCTCGAAATGGCGGCTCACGGTGCCGTCTTTTCCTGACGGCTTCAACAAAATAGACGTCGTCGCTGTCGCCGTTGTTTTACTCATCACTCTCGTCATCTGCTACAGCACGAGAGAGAGTTCGGTGGTGAACATGATTCTCACGGCGCTGCATATATTGTTCATAGCGTTCGTGATAATGGTAGGATTCTGGAGAGGGAGTTGGAAAAATTTCACCGAACCCGCTAACCCGGAAAACCCCGGCGGATTCTTTCCGCATGGCGCTGCCGGCGTTTTCAAAGGTGCCGCCTATGTTTACCTGAGTTACATCGGCTACGACGCCGTTTCGACCATGGCAGAGGAAGTGAAGGATCCCGTGAGGGATATTCCGGTTGGAGTGTCCGGTTCCGTCATTATCGTCACAGTTCTCTACTGTCTCATGGCCGCATCAATGACCAAACTTCTCCCTTACGATATGATCGATGCAGAAGCGCCGTTTTCGGCGGCGTTCAGTGGGAAATCGGACGGTTGGGGATGGGTGTCTCGAGTAATCGGGGTGGGGGCCAGTTTTGGGATACTGACGTCGCTGTTGGTGGCGATGCTGGGTCAGGCTCGTTACATGTGCGTCATCGGTCGCTCTAATGTGGTCCCCTCATGGTTCGCCAGGGTCCACCCAAGGACCTCCACCCCTGTCAACGCCTCCGCTTTCCTTGGGATCTTCACAGCAGCAATAGCCCTTTTCGCTGATCTTGATGTCCTGCTGAATCTGGTGTCAATTGGCACCCTGTTTGTGTTTTACATGGTGGCAAATGCCGTGATCTACAGACGTTATGTGGCAGCGGGGACAAGCAATCCATGGCCTACATTGTCCTTTCTGTGCTCGTTTTCCTTTACCGCAATGATGTTCACCCTTATTTGGAAATTTGTACCAACGGGAGGAGCGAAGGCAGGGATGCTGAGTGTCTCTGGTATTATTGCGATTGCAATATTACAACTTTTCCATTGCATGGTCCCTCAAGTTCGAAAGCCAGAATTCTGGGGTGTCCCATTCATGCCCTGGATACCCTCCATATCTATCTTTCTCAACGTGTTTCTGTTGGGATCTCTGGATGGGCCATCCTATGTTCGTTTTGCCTTCTTTTCGGCTGTTGCGGTGCTTTTCTATGTCTTTTACAGTGTCCATGCTAGCTTCGATGCTGAAGGAGATGGTTCTTTCACTGCAAAAAATGGAGAAATCCACGTGGACTCCAAGGGAATTGAGGACCAAACTTTCAAAGTATAG 1749 0.5517 MDSSSFSSLRAYLRALSHTPTRLARRALSISTSYDEMSHVRARSGTTMRKTLRWYDLVSLGIGGMVGAGVFVTTGRATRLYAGPAVLLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFMTGANLVVDYVLSNAAVARGFTAYLGAAIGISSSKWRLTVPSFPDGFNKIDVVAVAVVLLITLVICYSTRESSVVNMILTALHILFIAFVIMVGFWRGSWKNFTEPANPENPGGFFPHGAAGVFKGAAYVYLSYIGYDAVSTMAEEVKDPVRDIPVGVSGSVIIVTVLYCLMAASMTKLLPYDMIDAEAPFSAAFSGKSDGWGWVSRVIGVGASFGILTSLLVAMLGQARYMCVIGRSNVVPSWFARVHPRTSTPVNASAFLGIFTAAIALFADLDVLLNLVSIGTLFVFYMVANAVIYRRYVAAGTSNPWPTLSFLCSFSFTAMMFTLIWKFVPTGGAKAGMLSVSGIIAIAILQLFHCMVPQVRKPEFWGVPFMPWIPSISIFLNVFLLGSLDGPSYVRFAFFSAVAVLFYVFYSVHASFDAEGDGSFTAKNGEIHVDSKGIEDQTFKV* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2595 582 PANTHER CATIONIC AMINO ACID TRANSPORTER 6, CHLOROPLASTIC 3 567 - -
Vra8g2595 582 Pfam C-terminus of AA_permease 502 552 IPR029485 -
Vra8g2595 582 PIRSF AA_transporter 491 568 - -
Vra8g2595 582 PIRSF AA_transporter 35 496 - -
Vra8g2595 582 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 3 567 - -
Vra8g2595 582 Pfam Amino acid permease 53 483 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vra8g2595 582 Gene3D Amino acid/polyamine transporter I 47 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2595 Vra-Chr8 43886778 43891113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2595 139 567 Organic Solute Cotransporters AT3G10600 73.893 0.0 657
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2595 8 43886778 43891113 Vra8g2595 8 43886778 43891113 ECH