Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2578 ATGTGTCCAATTCCACCTGCCATGAAAACATTCATTCATCCTTTCTCCACTCCTTACAGTGCCTTTTTCACCTTTTCAGTTCCACTCATTTTTTTATATATATATATAAGCAAAGAATGGCATGAGGTTGCAAAGTGTAAAACCAGTCACCGAAAATCTATTCATTCCTTGCTTTCTTTCTTTCCTTCTTTTCTTTCAGCCTCTTCTTACATCCCAAGAAAAATAATGGCTACTCTTACCTCAAACGTATACCTTAGCCCACAATACAATGTTCCCAAAGACCATCATCTACCTCATGGTTGTGTAGTTGAGGAAATATCAGGGCTTATTAGAGTTCACAAAGATGGATACGTGGAACGACCACAAGTTCTTCCATGTGTCACTGCTAGTACTATGAGTCCAGAGCTAAATGTGACATCTGGAGACATGGTCATTGACAGTGCCACGAACACATGGGCACGTTTTTACGTTCCAATTTGCCAACACGAGTTGCCATTGCTTGTTTATTTCCACGGTGGAGGCTTTTGTGTTGGGTCAGCAGCATGGAGTTGCTACCATGATTTCCTTGCAAGGCTATCTGCCAAAGTGGGGTGTGTGATTATGTCAGTGAACTATCGATTGGCCCCAGAAAACCCTCTTCCAGCACCCTATGACGACGGATTAAGGGCCCTAATGTGGGTGAAGCAACAAATGCTATATGAACAACACAACATGGGTAGTGGTAGTAACAGTGAATGGTGGACTACAAAGTGTAACTTCTCCAGTGTCTTCTTGGGCGGGGACAGTGCTGGTGCTAACATAGCCTACAACGTTGCCACAAGGGTAGCTGCATGTGATGGTGCTGCTTTAAGGCCTTTGAGTCTGAAAGGTCTTATTTTGATACAACCCTTTTTCGGTGGGGAAGTGAGAACAGGTTCTGAGAAATGCATGGCTCAATCATCGGGTTCTGCTTTGAACTTGGCAGCATCTGACACTTATTGGCGCTTGGCGTTACCCTGTGGTGCGAACCGTGACCATCCGTGGTGCAACCCTTTGGTGAAAGTGAAGTTGGAGCAGTTGAAGGTCTTGCGTACCTTGGTGTGCATCTCGGAGATTGATATATTGAAAGATAGGAACTTGGAGTTTTGTGATACTTTGGTGAGAGCAGGGAAAAGGGTTGAGTTTGAGCTGTTCAGAGGTGTTGGACATGCGTTTCAGATTTTGAGTAAGTCTCAGATATCCAAGAACAGAACCATGGAAATGATGGCTCGTGTTAAATCCTTCATGGCTCTCTGA 1275 0.4424 MCPIPPAMKTFIHPFSTPYSAFFTFSVPLIFLYIYISKEWHEVAKCKTSHRKSIHSLLSFFPSFLSASSYIPRKIMATLTSNVYLSPQYNVPKDHHLPHGCVVEEISGLIRVHKDGYVERPQVLPCVTASTMSPELNVTSGDMVIDSATNTWARFYVPICQHELPLLVYFHGGGFCVGSAAWSCYHDFLARLSAKVGCVIMSVNYRLAPENPLPAPYDDGLRALMWVKQQMLYEQHNMGSGSNSEWWTTKCNFSSVFLGGDSAGANIAYNVATRVAACDGAALRPLSLKGLILIQPFFGGEVRTGSEKCMAQSSGSALNLAASDTYWRLALPCGANRDHPWCNPLVKVKLEQLKVLRTLVCISEIDILKDRNLEFCDTLVRAGKRVEFELFRGVGHAFQILSKSQISKNRTMEMMARVKSFMAL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2578 424 PANTHER ARYLACETAMIDE DEACETYLASE 87 422 - -
Vra8g2578 424 SUPERFAMILY alpha/beta-Hydrolases 96 421 IPR029058 -
Vra8g2578 424 Pfam alpha/beta hydrolase fold 167 399 IPR013094 GO:0016787
Vra8g2578 424 PANTHER CARBOXYLESTERASE 6-RELATED 87 422 - -
Vra8g2578 424 Gene3D alpha/beta hydrolase 108 423 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2578 Vra-Chr8 43730733 43732409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2578 76 422 Carbohydrate Esterase AT5G16080 52.825 1.15e-118 348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2578 8 43730733 43732409 Vra8g2578 8 43730733 43732409 ECH