Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2576 ATGAATAAGATCACGCATGCACAGAGATTAACCGCACCAGTGGGGTCATTCAGACACAGTTTCCTAGAGAAGAGCAAAGAGAGGCTCCTTTCCAAGAAGGACCTTATTGGTCTCCATGACGAAGTCAATGAACCCCGGGAACAACGTTCCTTCCTCGACGCCCTCTCCGATCGCGTCGTTAGCTTCCACAACAGGTCCAAAGACTTTGCCTTTAAATTGTACCAGATGGGTCGCAATGATCGACGTAAAATCGTCTTTGCGATCAAAGCTGGCTTGTCCTTAGCCATTGTCTCGCTTGTCATTTACGTTGAGGAGGAACAGTTTAGCAAGTACTCTATCTGGGCAATCCTAACTGTTGTCGTCGTTTTCGAATTCAGCATAGGTGCAACCCTGAATAAAGGTTTCAATCGGGCGTTGGGAACATTTTCTGCTGGAGTGCTTGCTCTGGGTCTTGCACAAGTATCCGTGTTCTTTGGTCGAGCTTTTGAGGAGATTTTTATTGTGGTCTCTATTTTTATTGCTGGGTTTATTGCGAGCTATGTGAGGCTGTACCCTGCGATGAAGCAATATGAATATGGCTTTCGTGTATTCTTGTTGACATTTTGTATTGTGTTAGTGTCTGGGAGAACTGGATTGCAATTTTTCTCAACAGCTTTTTACAGATTACTTCTAATTGGAATAGGTGCCGGTGTAAGTTTGTCTGTGAATATTTGCATTTATCCCATCTGGTCTGGGGAGGATCTGCACAAATTGGTGGTGAAAAATTTCAACGGAGTTGCCGCATCTTTAGAAGGTTGTGTAAATGGATACCTGCAATGCGTTGAATATGAGAGGGTACCATCCAAAATACTAGTTTATCAAGCCTCTGATGACCCTCTTTACAGGGGTTATAGAACAGCAGTGCAATCGTCAACTCAAGAGGAGTCTCTGGTAGATTTTGCACTATGGGAACCACCTCATGGTCCATACAAGATGTTCAACTATCCTTGGAAAAGCTACGTCAAAGTTAGTGGAGCATTGAGGCATTGTGCTTTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCGCCTCCAGAGAAGAGACTGGCTTTCTTTGAAGAACTTCAGAAGGTTGGTATTGAAGGAGCTAAAGTATTAAGAACACTAGGAAGCAAAGTGGAAAGGATGGAAAGGCTAAGCAACAGTGACATCCTCTTTGATGTTCATGATGCAGCGGAACAATTGCAGATGAAGATTGACAGATTGTCATTCCTCTTAGTCAACTATGAGAGCTGGGAAGCTGTGAGACTGCACAAGGAAAAAGAACATGAGAATTTGATGAAACGAGAGATCACTTCCCTGAATGAAATAAGAGATGATCCAAAACTTAACATAAAAATAGAACCTTCTACGCCAGGCAAGAGCTTATTGGGGCGCTCAAATTTATCTCAGTGCTCAGAAGGGACGGTACCTGAGCCAGAATCCAGCGTGTATGAAAGTGCGAGCTCCTTAACTTTGGCAACATTTGCTTCAAACTTGATCGAGTTTGTTGCGAGGCTTCAAAATCTCGTGGATGAATTTCAAGATCTTAGTGAGAAGGCTAACTTTAAAGACCCTTTTGAAGTGGAACAACCGTTGTTGAACTAG 1638 0.4322 MNKITHAQRLTAPVGSFRHSFLEKSKERLLSKKDLIGLHDEVNEPREQRSFLDALSDRVVSFHNRSKDFAFKLYQMGRNDRRKIVFAIKAGLSLAIVSLVIYVEEEQFSKYSIWAILTVVVVFEFSIGATLNKGFNRALGTFSAGVLALGLAQVSVFFGRAFEEIFIVVSIFIAGFIASYVRLYPAMKQYEYGFRVFLLTFCIVLVSGRTGLQFFSTAFYRLLLIGIGAGVSLSVNICIYPIWSGEDLHKLVVKNFNGVAASLEGCVNGYLQCVEYERVPSKILVYQASDDPLYRGYRTAVQSSTQEESLVDFALWEPPHGPYKMFNYPWKSYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRLAFFEELQKVGIEGAKVLRTLGSKVERMERLSNSDILFDVHDAAEQLQMKIDRLSFLLVNYESWEAVRLHKEKEHENLMKREITSLNEIRDDPKLNIKIEPSTPGKSLLGRSNLSQCSEGTVPEPESSVYESASSLTLATFASNLIEFVARLQNLVDEFQDLSEKANFKDPFEVEQPLLN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2576 545 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 15 539 - -
Vra8g2576 545 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 15 539 - -
Vra8g2576 545 Coils Coil 510 530 - -
Vra8g2576 545 Pfam Aluminium activated malate transporter 75 528 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2576 Vra-Chr8 43717998 43721517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2576 23 535 Miscellaneous Gene Families AT1G25480 59.375 0.0 598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2576 8 43717998 43721517 Vra8g2576 8 43717998 43721517 ECH