Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2560 ATGGCCACTGCTTTTCTCATTCCACTCTCATGGTCACCTCGGCTGTCTACTCCTTTCAAGGGAACAGTGAAAACCTTAGTTGCAAAACCATGTGTGAAGATTCAGCGAACAAGACCCATCGTTTTCGCAGGTTACAAGTCTACCTCTGCCCCGGTGGCAACGCCTCTGGTCGGCGTTCGGCTTCGGCTGGACAATTTGGGGCCCCAACCGGGTTCGAGGAAGAGGGCAAAGAGAAAGGGTAGAGGAATATCTGCAGGGCAAGGAGCAAGTTGTGGTTTTGGGATGAGGGGTCAGAAATCTCGATCTGGGCCTGGAGTTAGGAAGGGTTTCGAAGGTGGCCAGATGCCCCTTTATCGACGAATCCCCAAACTCAGAGGAATTGCAGGAGGTATGCACGCGGGATTGCCCAAATATGTCCATGTAAATCTGAGAGACATAGAAGATGCTAAATTTAAGGAAGGGGAAGAGGTGTCTCTCGAGTCACTGAAGGCTAAAGGTGTGATTAACCCATCAGGAAGAGAAAGAAGACTTCCTTTGAAGGTACATATTCTTCTTGATTTAATGACATAA 570 0.4877 MATAFLIPLSWSPRLSTPFKGTVKTLVAKPCVKIQRTRPIVFAGYKSTSAPVATPLVGVRLRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLKVHILLDLMT* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2560 189 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 87 175 IPR021131 -
Vra8g2560 189 MobiDBLite consensus disorder prediction 64 111 - -
Vra8g2560 189 Hamap 50S ribosomal protein L15 [rplO]. 63 178 IPR030878 GO:0003735|GO:0006412|GO:0015934
Vra8g2560 189 TIGRFAM rplO_bact: ribosomal protein uL15 63 170 IPR005749 GO:0003735|GO:0006412|GO:0015934
Vra8g2560 189 PANTHER 50S RIBOSOMAL PROTEIN L15 16 181 IPR005749 GO:0003735|GO:0006412|GO:0015934
Vra8g2560 189 SUPERFAMILY Ribosomal proteins L15p and L18e 64 170 IPR036227 -
Vra8g2560 189 PANTHER BNAA06G33230D PROTEIN 16 181 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2560 8 43547517 43549132 Vra8g2560 8 43547517 43549132 ECH