Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2558 ATGTCACTTCTTAACCAGCTTTTTAACAGAGGCGTTTTGGGAACTCGATGCAAAACATGCCTGAACCTCGCAATTTCACGCATTAAGCTGCTACAGAACAAAAGAGATGTGCAACTGAAACAAATGTGCAAGGAGATAAGCCAATTCTTGCAGGCTGGCCAAGAGGCAATTGCTAGAATCCGGGTGGAGCATATTATACGAGAACAAAATATATGGGCTGCATACGAAATCTTGGAGTTGTTCTGTGAATTTGTTCTTGCGCGTGTACCTATAATTGAGAACCAGAGGGAATGCCCCTCGGAATTGCGAGAAGCCATTGCAAGTATAATTTTTGCTGCTCCGAGATGTTCAGATGTACCAGACTTATTGCACGTCAAGAACTTGTTTACCACTAAATATGGGAAAGAATTTGTCTCTGCAGCATCAGAACTTCGTCCTGATTCAGGCGTAAACCGCACGATCATTGAAAAGCTTTCAGTTACTGCTCCATCTGGAGAGGTAAAACTCAAGGTCTTGAGGGAGATTGCTGAAGAATACAATATAGCATGGGATTCTTCTAAAACTGAGGCTGAATTTCGGAAAAATCATGAAGATCTTCTGGGAGGAGCAAAGCAACTTAGTGCTGGAGTTACGCTTTCTCATACGCCCAGCAGAAATGGTTCTAATAATTCACCATCTCGTACCACGGAACCTTCTAACAAGTCTGTGCATGATAAACAAGAATATAAACAACTTGAAGCTCCCAGCCTTTCTAACAATAATTCTGCATTGAATATTAATGAAATTGAACAGTCCCACAAAAATAATGATGTTCCCGTCGGAGATGCCCAAAGTGAGACAAGATTTCAGTCTTCTGATGTACTGGAGAAGGCGCGTGCTGCCATTGCTTCTGCAGATCGTGCATCAGCAGCTGCTCGTGCTGCTGCTGCACTAGTCCAGAATAGTTTTGCATCATTGAAGCTGGAAGGTAAATAA 975 0.4256 MSLLNQLFNRGVLGTRCKTCLNLAISRIKLLQNKRDVQLKQMCKEISQFLQAGQEAIARIRVEHIIREQNIWAAYEILELFCEFVLARVPIIENQRECPSELREAIASIIFAAPRCSDVPDLLHVKNLFTTKYGKEFVSAASELRPDSGVNRTIIEKLSVTAPSGEVKLKVLREIAEEYNIAWDSSKTEAEFRKNHEDLLGGAKQLSAGVTLSHTPSRNGSNNSPSRTTEPSNKSVHDKQEYKQLEAPSLSNNNSALNINEIEQSHKNNDVPVGDAQSETRFQSSDVLEKARAAIASADRASAAARAAAALVQNSFASLKLEGK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2558 324 Gene3D - 5 192 IPR042277 -
Vra8g2558 324 MobiDBLite consensus disorder prediction 211 239 - -
Vra8g2558 324 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Vra8g2558 324 PANTHER IST1 FAMILY MEMBER 16 312 IPR005061 GO:0015031
Vra8g2558 324 MobiDBLite consensus disorder prediction 211 231 - -
Vra8g2558 324 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 16 312 - -
Vra8g2558 324 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2558 Vra-Chr8 43517068 43520994 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2558 8 43517068 43520994 Vra8g2558 8 43517068 43520994 ECH