Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2557 ATGGAAATGTCCGAGGCACTCCGATGTCGATCACCCAGCTTCTCCCTCTTCCCACGTGCACCCATCTCTTCCACAGAGCACCCTCAGAATTTGATGCCCATTTCACCAAAATTCAGTTCAAACACAAGGCTGTCGGTGACAACGGCGAAGAAAAAGTCAAGCATCGAAGGTGTGAGCGAAGAGTTGACCGCCATAGCTTCTCTGAACCTTGACTTCGCACCCTCGCGGAGACGGGTTCGTTCAGCTTTCACCGAGGTGCACCAGCAGCTGGACCATTTCTTGTTCAAGGCTGCTCCTGCTGGGATCAAAACTGAGGAATGGTACGAAAGGAACTCCAGGGGATTGGAAATTTTCTGCAAAAGCTGGATGCCTGAATCTGGCGTTCCACTCAAGGCTGCTTTGTGTTTTTGTCATGGATATGGCAGCACTTGCACTTTTTTCTTTGAAGGTATTGCCAAAAGAATAGCTGCTTTTGGGTATGGTGTTTATGCTATGGACTATCCAGGTTTTGGTCTATCTGATGGATTACACGGTTATATACCAGATTTTGATGATTTGGTTAATGACGTTATAGAACATTATTCAAAAATCAAAGACAGGCCTGAGGTGAGTGGGTTGCCTCGATATATTATGGGGCAGTCTATGGGTGGAGCAATTGCTCTTAAGGTACATTTGAAGGAACCAAACACTTGGGATGGAGTAATCCTTGTTGCACCTATGTGTAAAATCGCAGAGGGTATGCTACCGCCAACTGCAGTTTTGAAGGTATTAAGTATTCTGTCTAAAGTGATGCCAAAGGCAAAGCTGTTCCCACACAAAGATATATCAGAGCTAACTTTCCGAGAACCTCGCAAGAGAAAAGTGGCTGGTTACAATGTTATTTCTTATGATGATCCAACACGATTGAAAACTGGCATGGAGCTTCTAAGTGCCACTCAAGAAATCGAGTCACAATTACATAAGGTTTCAGCTCCCTTATTGATTCTTCATGGGGCAGCAGATAAGGTGACAGATCCATTAGTGAGTCAATTTCTTTATGAGAAAGCTTCTAGCAAGGATAAGACACTGAAGATCTATGAAGGAGGTTACCACGGTATCTTGGAAGGAGAACCTGATGACAGAATTTCTGCTGTCCATAATGACATTATCTCATGGCTTGATTCTAGGTGCTAA 1173 0.4425 MEMSEALRCRSPSFSLFPRAPISSTEHPQNLMPISPKFSSNTRLSVTTAKKKSSIEGVSEELTAIASLNLDFAPSRRRVRSAFTEVHQQLDHFLFKAAPAGIKTEEWYERNSRGLEIFCKSWMPESGVPLKAALCFCHGYGSTCTFFFEGIAKRIAAFGYGVYAMDYPGFGLSDGLHGYIPDFDDLVNDVIEHYSKIKDRPEVSGLPRYIMGQSMGGAIALKVHLKEPNTWDGVILVAPMCKIAEGMLPPTAVLKVLSILSKVMPKAKLFPHKDISELTFREPRKRKVAGYNVISYDDPTRLKTGMELLSATQEIESQLHKVSAPLLILHGAADKVTDPLVSQFLYEKASSKDKTLKIYEGGYHGILEGEPDDRISAVHNDIISWLDSRC* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2557 390 PANTHER PHOSPHOLIPASE-RELATED 43 389 - -
Vra8g2557 390 Pfam Serine aminopeptidase, S33 131 371 IPR022742 -
Vra8g2557 390 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 43 389 - -
Vra8g2557 390 SUPERFAMILY alpha/beta-Hydrolases 85 388 IPR029058 -
Vra8g2557 390 Gene3D alpha/beta hydrolase 99 390 IPR029058 -
Vra8g2557 390 PRINTS Alpha/beta hydrolase fold signature 159 174 IPR000073 -
Vra8g2557 390 PRINTS Alpha/beta hydrolase fold signature 210 223 IPR000073 -
Vra8g2557 390 PRINTS Alpha/beta hydrolase fold signature 326 340 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2557 Vra-Chr8 43510498 43513820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2557 19 389 Acyl Lipid Metabolism Gene Families AT1G77420 60.904 7.95e-174 488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2557 8 43510498 43513820 Vra8g2557 8 43510498 43513820 ECH