Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2543 ATGGAAACCCAACTTGACTACAAAGCCAAAAGACCAAACCCCACTTCCCCAACAAGCCTAAAGATCTTTGGCTTCAGCGTCCATGAAGACATCACCATGGAAGAGGAAGACGAGGTGCTCATTCATGATGACGTGGAAGACTCAACCACCAAGGCATCTTCCACTTCCCCATCTGCCTCGCCGGACTCCGCCGGTGCCGGTTCCGGACCACCTTCCTCCGGCGACCGGAAATACGAGTGTCAATACTGCTGCCGAGAGTTCGCAAATTCACAAGCACTTGGTGGCCACCAGAACGCGCACAAAAAAGAGCGTCAACAATTGAAGCGTGCGCAATTACAGGCTACGCGAAACGCCGCCGTTTCCTTTGCGCGAAACCCCATGATCTCCGCCTTCGCCCCGCCGCCGCACCTGCTGGCTCCTCCGGGTTCCATGGTGGTCCCGGCGGCCCCGTGGGTGTACGTTCCGCCACGTGCCGCGCCGCCTCCCTTCCACGTGTCAGTATCGCACGGCTGTGCCTTCCCGTCGGCGAATGGCCACAACGGGTTGAGTAGTAGTAACAGTAACAACGTTACCATAACGGGTGTGAAATCCGCGGGTGCAGGGATGTTTCCCTATGTTGGCGTTGTGGGTGATTCGCAATTAGCTTTGTCAACGGTGCAGGTGCAGGCCCGGGCCCACCACACTGCGGTTGATGGGCCCTCTTTGAGTAGGTTCTCCAAAGGGGATGGTGGGCCCAAATTTGATGATGCATGGGGCTTGGATTTGCACCTTAGCCTTGCGCCAGCTGCGCCGTGA 795 0.5761 METQLDYKAKRPNPTSPTSLKIFGFSVHEDITMEEEDEVLIHDDVEDSTTKASSTSPSASPDSAGAGSGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFARNPMISAFAPPPHLLAPPGSMVVPAAPWVYVPPRAAPPPFHVSVSHGCAFPSANGHNGLSSSNSNNVTITGVKSAGAGMFPYVGVVGDSQLALSTVQVQARAHHTAVDGPSLSRFSKGDGGPKFDDAWGLDLHLSLAPAAP* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2543 264 SUPERFAMILY beta-beta-alpha zinc fingers 74 105 IPR036236 -
Vra8g2543 264 MobiDBLite consensus disorder prediction 50 67 - -
Vra8g2543 264 Gene3D Classic Zinc Finger 62 126 - -
Vra8g2543 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Vra8g2543 264 PANTHER ZINC FINGER PROTEIN 5 13 264 IPR044299 GO:0010090
Vra8g2543 264 PANTHER ZINC FINGER PROTEIN GIS3 13 264 - -
Vra8g2543 264 MobiDBLite consensus disorder prediction 1 22 - -
Vra8g2543 264 MobiDBLite consensus disorder prediction 34 75 - -
Vra8g2543 264 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2543 Vra-Chr8 43346871 43348099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2543 4 263 C2H2 Transcription Factor Family AT1G68360 43.066 3.76e-51 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2543 8 43346871 43348099 Vra8g2543 8 43346871 43348099 ECH