Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2541 ATGGCAGCTCACAGACTTGCTCTCGTAATCGAAAGCCCTTCAAAGGACGATGAATTTCTGCTCCTCAAGCAGCCGCGCCCTCCCAAATTCCACGACGAACAATACGACTCTTTCGTCGATTCTGATCTCTGGGACTTGCCCTCGGCGCAGTTAAACCTGCTGCTACCGGATTCGGACCCATCGCTTCTGGTGGAAGTTGCTCCCTCGCATGCCGAATTCAAGGACTTCGATTTCAGGAAATTCGATATCCGTTCGGCACTCAACGAGGTGTTTGGACAACTAGGGTATGGGGCGGTTGAAGGAGGAGGTTGGAAGTTCCTTAAGTATGTAAAGGAAGCTGCCTTTGGACCTGATTTACCCGTTAACACAGTCTTCGTTGGTGGGAAATTGGTAGCGGCTGAGGACAAAAACTCTATAGATTCATACAGATGGATGTCTATCCAAAGCTGTGTTAACTGGATTCAGGAATTGAAACCATGTGGAGATCGGGTTGGACCATTGGTTGTTCTTGGTCTTATAAACGAATCATCTTTCTCTACAAAGTGGAAAGTCCCACCAGCCATAAACCACCAGGAGTACCCACCTGGTGTTATCATTATACCTATGAGAAGTAGGACATTAAAGCCTTTTAGCACGACAAATTTGGTGGTGTTTGCACCTGAAAATGTTCCAAATAATTCTGAAGAAAATAATTTTGTTGCAAGTGGAGATGCACTCATCGTTGATCCAGGATGCCTATCTGAATTCCATGTAGAGCTAGAGAAAGTTGTTAATGCTTTGCCAAGACAACTAGTGGTCTTTGTCACTCATCATCATCATGATCATGTAGATGGTCTCTCAGTTATCCAGAAGTGCAACCCTGATGCTATTTTGTTAGCCCATGAAAAGACCATGCATCGCATAAGCAGAGATGATTGGTCCCTTGGCTATACCTCAGTTACAGGGGATGAAGACATTGTCATTGGTGGTCATAGATTGAGAGCAATTTATGCACCGGGACATACAGATGGCCATATGGCACTTCTTCATGCAAATTCTCATTCCTTGATTGTTGGTGATCATTGTCTGGGTCAGGGAAGTGCTGTCTTGGATCCAAGAGCTGGTGGAAATATGTCTGAGTATTTCCAAACCACATACAATTTTCTGGAGCTTTCGCCACACGCTTTAATACCAATGCATGGGAGAGTTAATGTCTGGCCAAAACAAATGCTGTGTGGATATCTAAAGAACCGCAGAAGTAGAGAAGCTAATATCCTGAAAGCAATTGAAGGTGGAGCAAAAACTTTGTTTGACATTGTAGAATATGTGTATTCTGATGTTGATCGTGGTGTCTGGGTTGCTGCATCAGCAAATGTGAGGCTCCATATGGATCATCTAGCTCAAGAACACAAGTTACCAAAGGATTTTTCAATCCAGAAGTTCAAAAATACCTGTGGCCTGCATTTTTTATCACGATGGATATGGGCTTACACTATTGGCAGTTTATTACATCAAATAGGGAGGTCTTCATTTCTTATTGGGGGTGTTCTTGTTTGCACTGCTGCATTGTACTGTCGAAACAAGTTCACTAAATAA 1575 0.4343 MAAHRLALVIESPSKDDEFLLLKQPRPPKFHDEQYDSFVDSDLWDLPSAQLNLLLPDSDPSLLVEVAPSHAEFKDFDFRKFDIRSALNEVFGQLGYGAVEGGGWKFLKYVKEAAFGPDLPVNTVFVGGKLVAAEDKNSIDSYRWMSIQSCVNWIQELKPCGDRVGPLVVLGLINESSFSTKWKVPPAINHQEYPPGVIIIPMRSRTLKPFSTTNLVVFAPENVPNNSEENNFVASGDALIVDPGCLSEFHVELEKVVNALPRQLVVFVTHHHHDHVDGLSVIQKCNPDAILLAHEKTMHRISRDDWSLGYTSVTGDEDIVIGGHRLRAIYAPGHTDGHMALLHANSHSLIVGDHCLGQGSAVLDPRAGGNMSEYFQTTYNFLELSPHALIPMHGRVNVWPKQMLCGYLKNRRSREANILKAIEGGAKTLFDIVEYVYSDVDRGVWVAASANVRLHMDHLAQEHKLPKDFSIQKFKNTCGLHFLSRWIWAYTIGSLLHQIGRSSFLIGGVLVCTAALYCRNKFTK* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2541 524 PANTHER ENDORIBONUCLEASE LACTB2 102 498 - -
Vra8g2541 524 Pfam Metallo-beta-lactamase superfamily 235 365 IPR001279 -
Vra8g2541 524 SUPERFAMILY Metallo-hydrolase/oxidoreductase 234 466 IPR036866 -
Vra8g2541 524 Pfam Beta-lactamase associated winged helix domain 428 464 IPR041516 -
Vra8g2541 524 SMART Lactamase_B_5a 228 393 IPR001279 -
Vra8g2541 524 PANTHER ENDORIBONUCLEASE LACTB2 102 498 - -
Vra8g2541 524 Gene3D - 225 399 IPR036866 -
Vra8g2541 524 Gene3D - 401 476 IPR036388 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2541 8 43314798 43328630 Vra8g2541 8 43314798 43328630 ECH