Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2536 ATGGCCTCTGGTGAAGGGAGGCGGCGTCATCATGATCTTGTGCCTCTTGCCGCATTGCTCAAGAGGGAGATGAAGAGTGAGAAGATGGAGAAGCCTACTGTGAGGTTTGGACATGCAGCTCAGTCCAAGAAAGGGGAGGATTACTTTCTTATCAAGACAGATTGTCAGCGAGTGCCCGGGAACCCTTCATCATCCTTTTCTGTATTTGCGATCTTTGATGGGCATAATGGAAATGCTGCTGCTATTTTTACTAGGGAGAATTTGTTAAATCACGTGTTGAGTGCTCTTCCTCGTGGACTTGGGCGAGATGAGTGGTTGCATGCTTTACCAAGGGCATTGGTTGCGGGTTTCGTTAAGACCGACAAGGAGTTTCAGAGCCGAGGAGAAACTTCTGGAACCACAGCCACGTTTGTAATAGTGGATAGGTGGACTGTTACTGTTGCATCTGTTGGAGATTCCCGTTGTGTACTAGATGCCCAGGGTGGTGCTATTTCCTCCTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGAGGGAACGTGTAACTGCTAGTGGAGGTGAAGTTGGGAGACTTAGCATAGTTGGTGGTGCAGAGATTGGTCCTCTTCGATGCTGGCCAGGGGGTCTATGCCTTTCTAGGTCAATTGGAGACATGGATGTTGGAGAGTTCATTGTTCCCATACCATATGTCAAACAAGTGAAGCTATCAAAGGCTGGTGGGAGGCTTATAATCGCCTCTGATGGCATATGGGATGCTCTATCCTCAGAAATGGCTGCAAAATCTTGTCGAGGTTTGCCTGCGGAACTTGCAGCTATGCAGGTTGTCAAGGAAGCACTACGAACGAGAGGATTAAAGGATGATACAACTTGCATAGTAGTTGACATAATCCCACCTGATAATGAATTGCCACCAACACCTCCCCCCCAAAAGCGGAACAAGCTGAGAGATCTTCTTTCCTTCAGGAAGAGATCCCGTGACTCTGCAAGTAAGCTATCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCGGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACTTAAACACGGGGCAATCAACATCTGGTATTTTTGTTTGTGCTGTTTGTCAAGTTGATCTTGCTCCAAGTGAGGGCATTTCTGTCCACGCCGGTTCAATTTTCTCCACCAGCTCCAAACCCTGGCAAGGTCCCTTTCTTTGTTCTGATTGCCGTGATAAGAAGGATGCCATGGAAGGAAAACGTCCAAGTGGAGTTAAGGTCTCATAG 1296 0.4645 MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRFGHAAQSKKGEDYFLIKTDCQRVPGNPSSSFSVFAIFDGHNGNAAAIFTRENLLNHVLSALPRGLGRDEWLHALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCVLDAQGGAISSLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPQKRNKLRDLLSFRKRSRDSASKLSKKLSAINIVEELFEEGSAMLAERLGNDDNLNTGQSTSGIFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCSDCRDKKDAMEGKRPSGVKVS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2536 431 PANTHER ALPHABET, ISOFORM E-RELATED 2 430 - -
Vra8g2536 431 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Vra8g2536 431 CDD PP2Cc 36 297 IPR001932 -
Vra8g2536 431 Pfam Protein phosphatase 2C 61 269 IPR001932 -
Vra8g2536 431 Gene3D - 35 301 IPR036457 -
Vra8g2536 431 SMART PP2C_4 27 295 IPR001932 -
Vra8g2536 431 SMART PP2C_SIG_2 51 297 IPR001932 -
Vra8g2536 431 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 430 - -
Vra8g2536 431 SUPERFAMILY PP2C-like 40 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2536 Vra-Chr8 43279101 43283952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2536 1 430 PP2C-type Phosphatase Gene Family AT1G68410 79.358 0.0 702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2536 8 43279101 43283952 Vra8g2536 8 43279101 43283952 ECH